RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ADAT3Q96EY9 351 aaPredicted RBP12.11□□□□□ -0.47
SSBP1-201ENST00000265304 SORCS2Q96PQ0 1159 aa12.11□□□□□ -0.47
SSBP1-201ENST00000265304 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
SSBP1-201ENST00000265304 NDUFB11Q9NX14 153 aa12.11□□□□□ -0.47
SSBP1-201ENST00000265304 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
SSBP1-201ENST00000265304 FAHP16930 419 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 GABRA5P31644 462 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 CFHR2P36980 270 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 GP2P55259 537 aaKnown RBP12.1□□□□□ -0.47
SSBP1-201ENST00000265304 PRDX4Q13162 271 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 TESK1Q15569 626 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 ODF4Q2M2E3 257 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 ZNF181Q2M3W8 571 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 CEACAM21Q3KPI0 293 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 SERPINA12Q8IW75 414 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 OR5AS1Q8N127 324 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 ZCCHC24Q8N2G6 241 aaKnown RBP12.1□□□□□ -0.47
SSBP1-201ENST00000265304 BHLHE23Q8NDY6 225 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 DNAAF1Q8NEP3 725 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 FGGYQ96C11 551 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 TRMT61AQ96FX7 289 aaKnown RBP12.1□□□□□ -0.47
SSBP1-201ENST00000265304 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 PLEKHA6Q9Y2H5 1048 aa12.1□□□□□ -0.47
SSBP1-201ENST00000265304 LOC100289279A0A1B0GTE1 492 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 ANKRD61A6NGH8 418 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 OR5B21A6NL26 309 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 H0YL77 283 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 LMX1BO60663 402 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 NCR1O76036 304 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 FSTL3O95633 263 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 SERPINA3P01011 423 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 NRASP01111 189 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 TFAP2AP05549 437 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 CD2P06729 351 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 ACAA1P09110 424 aaPredicted RBP12.09□□□□□ -0.47
SSBP1-201ENST00000265304 IGFBP3P17936 291 aaPredicted RBP12.09□□□□□ -0.47
SSBP1-201ENST00000265304 FSTP19883 344 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 CRYBB2P43320 205 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 PTH2RP49190 550 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 MZT1Q08AG7 82 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 TMEM91Q6ZNR0 172 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 OR5D14Q8NGL3 314 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 Q8TCH9 128 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 ELMOD3Q96FG2 381 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 DERL3Q96Q80 235 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 FOXC2Q99958 501 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 FGF23Q9GZV9 251 aaPredicted RBP12.09□□□□□ -0.47
SSBP1-201ENST00000265304 PPP1R3EQ9H7J1 279 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
SSBP1-201ENST00000265304 MYOZ1Q9NP98 299 aaPredicted RBP12.09□□□□□ -0.47
SSBP1-201ENST00000265304 DHDHQ9UQ10 334 aa12.09□□□□□ -0.47
SSBP1-201ENST00000265304 FLNAP21333 2647 aaKnown RBP12.09□□□□□ -0.47
SSBP1-201ENST00000265304 ACANP16112 2415 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 IGKV1-9A0A0C4DH69 117 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 TRDV1A0A1B0GX56 115 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 PQLC2LA1A4F0 135 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 TMEM210A6NLX4 147 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ZNF850A8MQ14 1090 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 IFNL4K9M1U5 179 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 CCRL2O00421 344 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 PIN1P1O15428 100 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 RP2O75695 350 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 IGHV4-39P01824 125 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 HPXP02790 462 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ALDOBP05062 364 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 OCM2P0CE71 109 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 HSMCR30P0CW71 290 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 TNFRSF1AP19438 455 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 TNFSF4P23510 183 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 FGF9P31371 208 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 GNALP38405 381 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 CDKN1AP38936 164 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 MAGEB1P43366 347 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ALDH3B2P48448 385 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 SRP9P49458 86 aaKnown RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 OR8G1Q15617 311 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 TSTQ16762 297 aaKnown RBP12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ACSM3Q53FZ2 586 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 CRIP3Q6Q6R5 217 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 WDR86Q86TI4 376 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 CDH24Q86UP0 819 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 COMMD2Q86X83 199 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 LYPD6Q86Y78 171 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 CDH26Q8IXH8 852 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 C11orf53Q8IXP5 236 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 ZDHHC23Q8IYP9 409 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 OR2Z1Q8NG97 314 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 OR13C3Q8NGS6 347 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 PIGCQ92535 297 aa12.08□□□□□ -0.48
SSBP1-201ENST00000265304 TMEM106AQ96A25 262 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms