RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 TMEM163Q8TC26 289 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 RNF170Q96K19 258 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 ZNF48Q96MX3 618 aaPredicted RBP13.34□□□□□ -0.27
USE1-201ENST00000263897 OR8B4Q96RC9 309 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 CNN2Q99439 309 aaKnown RBP13.34□□□□□ -0.27
USE1-201ENST00000263897 RTL8AQ9BWD3 113 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 GABARAPL1Q9H0R8 117 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 SMURF1Q9HCE7 757 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 COPS3Q9UNS2 423 aa13.34□□□□□ -0.27
USE1-201ENST00000263897 TMEM210A6NLX4 147 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.33□□□□□ -0.28
USE1-201ENST00000263897 M0R129 80 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 DVL1O14640 695 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 FCN3O75636 299 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 PRTN3P24158 256 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 MTNR1AP48039 350 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 CENPNQ96H22 339 aaPredicted RBP13.33□□□□□ -0.28
USE1-201ENST00000263897 HIST1H2AAQ96QV6 131 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 IL4I1Q96RQ9 567 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 PKP2Q99959 881 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 PBOV1Q9GZY1 135 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 ENOPH1Q9UHY7 261 aa13.33□□□□□ -0.28
USE1-201ENST00000263897 SOX21Q9Y651 276 aaPredicted RBP13.33□□□□□ -0.28
USE1-201ENST00000263897 TRAV40A0A0B4J280 105 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 SRRM5B3KS81 715 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 TMPRSS2O15393 492 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 ECDO95905 644 aaPredicted RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 CFPP27918 469 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 RIDAP52758 137 aaKnown RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 BPIFB3P59826 476 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 BAMBIQ13145 260 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 ATPAF1Q5TC12 328 aaPredicted RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 PNLDC1Q8NA58 520 aaKnown RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 SCCPDHQ8NBX0 429 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 OR10Z1Q8NGY1 313 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 FAM81AQ8TBF8 368 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 HPSE2Q8WWQ2 592 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 RPL3LQ92901 407 aaKnown RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 PPP1R14AQ96A00 147 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 C12orf43Q96C57 262 aaKnown RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 SEH1LQ96EE3 360 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 MNTQ99583 582 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 CCL13Q99616 98 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 CIB1Q99828 191 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 APOL4Q9BPW4 351 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 FGF23Q9GZV9 251 aaPredicted RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 SEMA6AQ9H2E6 1030 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 HAO2Q9NYQ3 351 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 NUFIP1Q9UHK0 495 aaKnown RBP13.32□□□□□ -0.28
USE1-201ENST00000263897 IKZF2Q9UKS7 526 aa13.32□□□□□ -0.28
USE1-201ENST00000263897 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 DNAJC9-AS1A6NH13 148 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 P2RY10O00398 339 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 CIB2O75838 187 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 TOX4O94842 621 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 IGLV3-1P01715 115 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 MMP9P14780 707 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 AMY2BP19961 511 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 POLR2IP36954 125 aaKnown RBP13.31□□□□□ -0.28
USE1-201ENST00000263897 CXCR4P61073 352 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 ACTR3P61158 418 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 ELF3P78545 371 aaPredicted RBP13.31□□□□□ -0.28
USE1-201ENST00000263897 ZNF829Q3KNS6 432 aaPredicted RBP13.31□□□□□ -0.28
USE1-201ENST00000263897 CEACAM21Q3KPI0 293 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 WDR38Q5JTN6 314 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 ZNF322Q6U7Q0 402 aaPredicted RBP13.31□□□□□ -0.28
USE1-201ENST00000263897 KCTD8Q6ZWB6 473 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 BTN2A1Q7KYR7 527 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 SLC36A1Q7Z2H8 476 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 SLC35F2Q8IXU6 374 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 ZDHHC23Q8IYP9 409 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 OR51E1Q8TCB6 317 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 WDFY2Q96P53 400 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 PCGF1Q9BSM1 259 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 TTTY10Q9BZA0 68 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 ZMAT3Q9HA38 289 aaKnown RBP13.31□□□□□ -0.28
USE1-201ENST00000263897 ADGRL4Q9HBW9 690 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 GPR84Q9NQS5 396 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
USE1-201ENST00000263897 CLDN34H7C241 214 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 MAGEB4O15481 346 aaPredicted RBP13.3□□□□□ -0.28
USE1-201ENST00000263897 SRSF10O75494 262 aaKnown RBP13.3□□□□□ -0.28
USE1-201ENST00000263897 SFTPBP07988 381 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 TGM4P49221 684 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 RIPPLY1Q0D2K3 151 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 GPR157Q5UAW9 335 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 BRD3OSQ6XYD6 125 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 ASRGL1Q7L266 308 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 GID4Q8IVV7 300 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 C3orf56Q8N813 242 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 OR5T2Q8NGG2 359 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 OR5A2Q8NGI9 324 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 FAM71F1Q96KD3 344 aaPredicted RBP13.3□□□□□ -0.28
USE1-201ENST00000263897 TBX15Q96SF7 602 aa13.3□□□□□ -0.28
USE1-201ENST00000263897 OSBPL10Q9BXB5 764 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms