RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 CD300LBA8K4G0 201 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 CST4P01036 141 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 AWAT2Q6E213 333 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 Q8N402 240 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 PIGCQ92535 297 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 C1orf147Q96MC9 270 aaPredicted RBP19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 GPER1Q99527 375 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 NEK6Q9HC98 313 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 CRIM1Q9NZV1 1036 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 FBLN5Q9UBX5 448 aa19.69■□□□□ 0.74
SMARCB1-201ENST00000263121 CTAG2O75638 210 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 RAB6AP20340 208 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 CDK2P24941 298 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 SPATA46Q5T0L3 261 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 PNLDC1Q8NA58 520 aaKnown RBP19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 OR10A4Q9H209 315 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 NPAP1Q9NZP6 1156 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 SPTA1P02549 2419 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 ZNF850A8MQ14 1090 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 C16orf97H3BN30 126 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 CCL21O00585 134 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 VSIG8P0DPA2 414 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 MNDAP41218 407 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 ALDH3B1P43353 468 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 RGS21Q2M5E4 152 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 PLCXD3Q63HM9 321 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 GLIPR1L1Q6UWM5 242 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 SEZ6L2Q6UXD5 910 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 LHFPL2Q6ZUX7 228 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 MOB3CQ70IA8 216 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 IZUMO1Q8IYV9 350 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 OR1J1Q8NGS3 322 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 RFT1Q96AA3 541 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 CCDC120Q96HB5 630 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 OR2J1Q9GZK6 312 aa19.68■□□□□ 0.74
SMARCB1-201ENST00000263121 RP1L1Q8IWN7 2480 aaPredicted RBP19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 TMEM14DPA8MWL7 114 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 NAT2P11245 290 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 CALCRP30988 508 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 PTGFRP43088 359 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 ZNF83P51522 516 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 FUT6P51993 359 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 ERVS71-1P61550 626 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 PITPNAQ00169 270 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 NAAAQ02083 359 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 UNC119Q13432 240 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 OR10K2Q6IF99 312 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 FTMTQ8N4E7 242 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 SLC25A40Q8TBP6 338 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 CPNE2Q96FN4 548 aaPredicted RBP19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 PAPOLGQ9BWT3 736 aaKnown RBP19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 GPR160Q9UJ42 338 aa19.67■□□□□ 0.74
SMARCB1-201ENST00000263121 IGKV1-27A0A075B6S5 117 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 A0A1W2PQ09 198 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 TPPPO94811 219 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 HLA-DQB1P01920 261 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 UBBP0CG47 229 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 TUBG1P23258 451 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 RAD52P43351 418 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 PTH2RP49190 550 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 RBP2P50120 134 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 MTCP1P56278 107 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 ZP1P60852 638 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 PRDX4Q13162 271 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 TMEM69Q5SWH9 247 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 UNQ6126/PRO20091Q6UXV3 157 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 C22orf34Q6ZV56 151 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 OR2W3Q7Z3T1 314 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 CMBLQ96DG6 245 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 BORCS8Q96FH0 119 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 OCEL1Q9H607 264 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 TUBG2Q9NRH3 451 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 MYEF2Q9P2K5 600 aaKnown RBP19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 GHRLQ9UBU3 117 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 RAB22AQ9UL26 194 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 SLC7A11Q9UPY5 501 aa19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 MRPS7Q9Y2R9 242 aaKnown RBP19.66■□□□□ 0.74
SMARCB1-201ENST00000263121 FAM230AA0A1W2PPH8 454 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 CTDSPLO15194 276 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 XRCC3O43542 346 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 RAC2P15153 192 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 MMP15P51511 669 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 OR2T2Q6IF00 324 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 OR5D18Q8NGL1 313 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 TNFAIP8L1Q8WVP5 186 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 MARS2Q96GW9 593 aaKnown RBP19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 BCL2L14Q9BZR8 327 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 POLEQ07864 2286 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 M0R1B8 84 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 LILRA1O75019 489 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 KDM4BO94953 1096 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 TAS2R20P59543 309 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 C1QL2Q7Z5L3 287 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 ZDHHC23Q8IYP9 409 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 CHPT1Q8WUD6 406 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 ATG5Q9H1Y0 275 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 DIABLOQ9NR28 239 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 NBEAQ8NFP9 2946 aa19.65■□□□□ 0.74
SMARCB1-201ENST00000263121 C1orf174Q8IYL3 243 aa19.64■□□□□ 0.73
SMARCB1-201ENST00000263121 BHLHE23Q8NDY6 225 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms