RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 NRTNQ99748 197 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 MTCH1Q9NZJ7 389 aa7.33□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF736B4DX44 427 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 RAB3DO95716 219 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 COX6A1P12074 109 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CSN1S1P47710 185 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 STAC2Q6ZMT1 411 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CD163Q86VB7 1156 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 OR1M1Q8NGA1 313 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 OR10AD1Q8NGE0 317 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SLC7A6Q92536 515 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF75AQ96N20 296 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 RHNO1Q9BSD3 238 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 ARL6Q9H0F7 186 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 RIF1Q5UIP0 2472 aaKnown RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A10PA6NDY2 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A18PA6NE21 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A16PA6NEW6 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A20PA6NIJ5 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A8PA6NJQ4 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A7PA6NKC0 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SERPINE3A8MV23 424 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A22PA8MWA6 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A12PA8MX19 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A5PA8MXJ8 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A23PA8MXZ1 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SNCGO76070 127 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CLDN1O95832 211 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 ADH4P08319 380 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A15PP0C7V4 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A13PP0C7W8 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A14PP0C7W9 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM90A24PP0C7X0 464 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SUB1P53999 127 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 INSM1Q01101 510 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 LTBQ06643 244 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CLVS2Q5SYC1 327 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 PFDN5Q99471 154 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 PPP1R3EQ9H7J1 279 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 BARX1Q9HBU1 254 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CRLF2Q9HC73 371 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 LRP5LA4QPB2 252 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 PPIHO43447 177 aaKnown RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 AGFG2O95081 481 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CD96P40200 585 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SNRPD2P62316 118 aaKnown RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM219BQ5XKK7 198 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CATSPERDQ86XM0 798 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 C1orf87Q8N0U7 546 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CORO2AQ92828 525 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 OCIAD1Q9NX40 245 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 TAS2R16Q9NYV7 291 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 A0A0U1RQV5 110 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 ATXN7O15265 892 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 THY1P04216 161 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CTXN2P0C2S0 81 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM157BP0CG42 384 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 PRKACAP17612 351 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SOX18P35713 384 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAM74A1Q5RGS3 127 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAHD2BQ6P2I3 314 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 Q7L0L9 218 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 GALNT16Q8N428 558 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FAHD2AQ96GK7 314 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 DDOQ99489 341 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 BARHL1Q9BZE3 327 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 OR11A1Q9GZK7 315 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 ST6GALNAC2Q9UJ37 374 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 TRBV5-7A0A0A0MS05 114 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 RFX2P48378 723 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CISD2Q8N5K1 135 aaKnown RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CT55Q8WUE5 264 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 PLEKHB1Q9UF11 243 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 MRM2Q9UI43 246 aaKnown RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 KIF25Q9UIL4 384 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 HSPB11Q9Y547 144 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 HELZP42694 1942 aaKnown RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 AKR7A2O43488 359 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 XRCC3O43542 346 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CRYAAP02489 173 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 PLA1AQ53H76 456 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 CDCP2Q5VXM1 449 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 DCXRQ7Z4W1 244 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 FJX1Q86VR8 437 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 WDR31Q8NA23 367 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 OR6F1Q8NGZ6 308 aa7.32□□□□□ -1.24
PTPN3-201ENST00000262539 EP300Q09472 2414 aaPredicted RBP7.32□□□□□ -1.24
PTPN3-201ENST00000262539 SERTM2A0A1B0GWG4 89 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 TMEM200CA6NKL6 621 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 TNFSF11O14788 317 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 BMI1P35226 326 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF574Q6ZN55 896 aaPredicted RBP7.31□□□□□ -1.24
PTPN3-201ENST00000262539 OR10G3Q8NGC4 313 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 RBMXL1Q96E39 390 aaKnown RBP7.31□□□□□ -1.24
PTPN3-201ENST00000262539 TMEM74BQ9NUR3 256 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 SLC22A13Q9Y226 551 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 PIGLQ9Y2B2 252 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 CENPVL1A0A0U1RR11 272 aa7.31□□□□□ -1.24
PTPN3-201ENST00000262539 ZNF724A8MTY0 619 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms