RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 MS4A18Q3C1V0 323 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 MIDNQ504T8 468 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 ACER2Q5QJU3 275 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 PRAMEF20Q5VT98 475 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 ARHGEF39Q8N4T4 335 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 PHF7Q9BWX1 381 aaPredicted RBP11.48□□□□□ -0.57
SNX1-201ENST00000261889 SLC19A3Q9BZV2 496 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 GSN-AS1Q9NRJ2 163 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 FLVCR1Q9Y5Y0 555 aa11.48□□□□□ -0.57
SNX1-201ENST00000261889 TEX13DA0A0J9YY54 714 aaPredicted RBP11.47□□□□□ -0.57
SNX1-201ENST00000261889 H3BMH7 237 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 STMND1H3BQB6 276 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 TXNDC12O95881 172 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 FAHP16930 419 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 OR1D5P58170 312 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
SNX1-201ENST00000261889 SLC26A5P58743 744 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 FOXF1Q12946 379 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.47□□□□□ -0.57
SNX1-201ENST00000261889 P4HA3Q7Z4N8 544 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 HLA-CQ95604 372 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 LRFN5Q96NI6 719 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 RTBDNQ9BSG5 229 aaPredicted RBP11.47□□□□□ -0.57
SNX1-201ENST00000261889 TMEM59Q9BXS4 323 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ADAM19Q9H013 955 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 GDF9O60383 454 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ARL4DP49703 201 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 P2RY4P51582 365 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 NXT1Q9UKK6 140 aaKnown RBP11.47□□□□□ -0.57
SNX1-201ENST00000261889 RAB22AQ9UL26 194 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 PATE4P0C8F1 98 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 FCGR2CP31995 323 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 MEF2DQ14814 521 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 DHRS7BQ6IAN0 325 aaPredicted RBP11.47□□□□□ -0.57
SNX1-201ENST00000261889 ZNF343Q6P1L6 599 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ZNF283Q8N7M2 679 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ZNF721Q8TF20 911 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ADIPOR1Q96A54 375 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 KIRREL1Q96J84 757 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 RARRES2Q99969 163 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 UQCC2Q9BRT2 126 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 LANCL2Q9NS86 450 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 CUTCQ9NTM9 273 aa11.47□□□□□ -0.57
SNX1-201ENST00000261889 ARPC4-TTLL3A0A0A6YYG9 625 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 PMS2P1A4D2B8 440 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 CDRT15L2A8MXV6 281 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 SPRY1O43609 319 aaPredicted RBP11.46□□□□□ -0.57
SNX1-201ENST00000261889 APOC1P02654 83 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 FOSL2P15408 326 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 TMEM33P57088 247 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 OR2AE1Q8NHA4 323 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 HIST1H2BAQ96A08 127 aa11.46□□□□□ -0.57
SNX1-201ENST00000261889 CD79AP11912 226 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 PGCP20142 388 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 IGFBP4P22692 258 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 PTGER4P35408 488 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 HSF1Q00613 529 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 TMEM128Q5BJH2 165 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 MEX3BQ6ZN04 569 aaKnown RBP11.46□□□□□ -0.58
SNX1-201ENST00000261889 OR5T2Q8NGG2 359 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 OR8B12Q8NGG6 310 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 GPBAR1Q8TDU6 330 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 HOXB13Q92826 284 aaPredicted RBP11.46□□□□□ -0.58
SNX1-201ENST00000261889 DAZLQ92904 295 aaKnown RBP11.46□□□□□ -0.58
SNX1-201ENST00000261889 RHOVQ96L33 236 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 MMP26Q9NRE1 261 aa11.46□□□□□ -0.58
SNX1-201ENST00000261889 DHRS7CA6NNS2 312 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 FGF16O43320 207 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 HOGA1Q86XE5 327 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 SLC22A24Q8N4F4 322 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 OR5L1Q8NGL2 311 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 OR11L1Q8NGX0 322 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 CDC14BO60729 498 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 FOLR1P15328 257 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 NHLH2Q02577 135 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 TAF9Q16594 264 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 ISXQ2M1V0 245 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 NUP54Q7Z3B4 507 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 ASB17Q8WXJ9 295 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 ZNF2Q9BSG1 426 aaPredicted RBP11.45□□□□□ -0.58
SNX1-201ENST00000261889 WWTR1Q9GZV5 400 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.45□□□□□ -0.58
SNX1-201ENST00000261889 FAM206AQ9NX38 181 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 KNTC1P50748 2209 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 C7orf77A4D0Y5 90 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 OR5K4A6NMS3 321 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 A8MVM7 634 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 C10orf142B7Z368 130 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 HSPB6O14558 160 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 IL2RAP01589 272 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 PPP1CCP36873 323 aaKnown RBP11.45□□□□□ -0.58
SNX1-201ENST00000261889 ROM1Q03395 351 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 SLC30A7Q8NEW0 376 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 CDC6Q99741 560 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 MAGT1Q9H0U3 335 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 LIME1Q9H400 295 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 LAMA5O15230 3695 aa11.45□□□□□ -0.58
SNX1-201ENST00000261889 IGKV1-9A0A0C4DH69 117 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 K7EPK0 472 aa11.44□□□□□ -0.58
SNX1-201ENST00000261889 EFNA2O43921 213 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms