RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 GAB4Q2WGN9 574 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 ACOT6Q3I5F7 207 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 TIGITQ495A1 244 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 MOGAT3Q86VF5 341 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 C1orf174Q8IYL3 243 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 WDR34Q96EX3 536 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 BTF3L4Q96K17 158 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 ATP5SQ99766 215 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 C20orf24Q9BUV8 137 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 SEBOXQ9HB31 216 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 SHPKQ9UHJ6 478 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 APOC3P02656 99 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 PPP3CBP16298 524 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 PTGFRP43088 359 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 ELLP55199 621 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 OR5I1Q13606 314 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF141Q15928 474 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 ARHGEF39Q8N4T4 335 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 GPX8Q8TED1 209 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 PECRQ9BY49 303 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 GABARAPL1Q9H0R8 117 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 BIN3Q9NQY0 253 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 LRP12Q9Y561 859 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 OR5B21A6NL26 309 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 ANKRD34CP0C6C1 535 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 CCL2P13500 99 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 TMEM147Q9BVK8 224 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 SAMD10Q9BYL1 202 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 NDUFB11Q9NX14 153 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
PDGFRB-201ENST00000261799 OR2M5A3KFT3 312 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 K7ESF4 209 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 CD1EP15812 388 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PDLIM4P50479 330 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 SPANXN5Q5MJ07 72 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 ZFP82Q8N141 532 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 SPACA5Q96QH8 159 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PFDN5Q99471 154 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 SLC22A13Q9Y226 551 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 CTSSP25774 331 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 SLC35B1P78383 322 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 NUDT8Q8WV74 236 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PUS1Q9Y606 427 aaKnown RBP eCLIP12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PCP4L1A6NKN8 68 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PLPP3O14495 311 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 DHRS3O75911 302 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 SNCGO76070 127 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 FGF5P12034 268 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 FUT3P21217 361 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PNLIPRP3Q17RR3 467 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 BEX5Q5H9J7 111 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 CGB2Q6NT52 195 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 MAVSQ7Z434 540 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF683Q8IZ20 524 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 OR6X1Q8NH79 312 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 DEDD2Q8WXF8 326 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 FGF2P09038 288 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 APEHP13798 732 aaKnown RBP12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 CEACAM6P40199 344 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 CASP3P42574 277 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 FAM26EQ8N5C1 309 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 OR10R2Q8NGX6 335 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 OTOSQ8NHW6 89 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 CLN8Q9UBY8 286 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 SLC25A1P53007 311 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 ATP5J2P56134 94 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 HRH4Q9H3N8 390 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 KCNE3Q9Y6H6 103 aa12.1□□□□□ -0.47
PDGFRB-201ENST00000261799 A0A1W2PN81 502 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 FITM1A5D6W6 292 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 BOLA2-SMG1P6H3BVE0 249 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 CHRNA7P36544 502 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 TESK1Q15569 626 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 VN1R4Q7Z5H5 301 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 FOXD3Q9UJU5 478 aaPredicted RBP12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF835Q9Y2P0 537 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 MICAL3Q7RTP6 2002 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 SERTM2A0A1B0GWG4 89 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 HPNP05981 417 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 CST2P09228 141 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 RHOBP62745 196 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 FUNDC1Q8IVP5 155 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF547Q8IVP9 402 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 UBE2FQ969M7 185 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 NEIL1Q96FI4 390 aaPredicted RBP12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 ST8SIA3O43173 380 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 CTRB1P17538 263 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 ETV1P50549 477 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 FOXO1Q12778 655 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 CTRB2Q6GPI1 263 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 RHOXF1Q8NHV9 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms