RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 YARS2Q9Y2Z4 477 aaKnown RBP3.09□□□□□ -1.92
CCDC54-201ENST00000261058 OR51B4Q9Y5P0 310 aa3.09□□□□□ -1.92
CCDC54-201ENST00000261058 ARL5AQ9Y689 179 aa3.09□□□□□ -1.92
CCDC54-201ENST00000261058 WDR97A6NE52 1622 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 COL22A1Q8NFW1 1626 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 MSH6P52701 1360 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 DHX57Q6P158 1386 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 C9orf170A2RU37 121 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 H3BNH8 94 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 M0QXV9 152 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 DFFAO00273 331 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PHYHO14832 338 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SLC16A4O15374 487 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SLC31A1O15431 190 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CXCL13O43927 109 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PLIN3O60664 434 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 TBL1XO60907 577 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 C1orf105O95561 183 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 FAM107AO95990 144 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 FGGP02679 453 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 KLK3P07288 261 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 KCNE1P15382 129 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CD1EP15812 388 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 GABRR1P24046 479 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PAX6P26367 422 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 ELK4P28324 431 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CALCRP30988 508 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CEACAM6P40199 344 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 KPNA2P52292 529 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 VSX2P58304 361 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 TAS2R39P59534 338 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 LSM6P62312 80 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 IFITM2Q01629 132 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SEMG2Q02383 582 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 RAB31Q13636 194 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SF3A2Q15428 464 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 TAF1AQ15573 450 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 TRIP13Q15645 432 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 POU2AF1Q16633 256 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 ATP6V1FQ16864 119 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 LIN52Q52LA3 116 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 IDNKQ5T6J7 187 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 N4BP2L1Q5TBK1 243 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 LPCAT4Q643R3 524 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 FAHD1Q6P587 224 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 DHRS4L2Q6PKH6 230 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 COX15Q7KZN9 410 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 ANGPTL5Q86XS5 388 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CALHM1Q8IU99 346 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CTAGE3PQ8IX95 158 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PXT1Q8NFP0 134 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 OR10W1Q8NGF6 305 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 OR9A2Q8NGT5 310 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PIGXQ8TBF5 258 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 ACER1Q8TDN7 264 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 NAT14Q8WUY8 206 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 APH1BQ8WW43 257 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 MRPS31Q92665 395 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 NEIL2Q969S2 332 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 APH1AQ96BI3 265 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 C12orf43Q96C57 262 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CMTM5Q96DZ9 223 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SMIM12Q96EX1 92 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PHYHIPLQ96FC7 376 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 C16orf74Q96GX8 76 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CENPNQ96H22 339 aaPredicted RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 MAGEB18Q96M61 343 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 FOPNLQ96NB1 174 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SMIM14Q96QK8 99 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 ARMC7Q9H6L4 198 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SIAEQ9HAT2 523 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 UGT1A7Q9HAW7 530 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 UGT1A8Q9HAW9 530 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 EML4Q9HC35 981 aaKnown RBP3.08□□□□□ -1.92
CCDC54-201ENST00000261058 TMEM138Q9NPI0 162 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 SIRT7Q9NRC8 400 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 PLEKHJ1Q9NW61 149 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
CCDC54-201ENST00000261058 CPSF1Q10570 1443 aaKnown RBP3.07□□□□□ -1.92
CCDC54-201ENST00000261058 PRRC2AP48634 2157 aaKnown RBP3.07□□□□□ -1.92
CCDC54-201ENST00000261058 RIMS1Q86UR5 1692 aaKnown RBP3.07□□□□□ -1.92
CCDC54-201ENST00000261058 GAPVD1Q14C86 1478 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 ARHGEF10O15013 1369 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 TAF1LQ8IZX4 1826 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 PSMB11A5LHX3 300 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 TRDCB7Z8K6 153 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 C9J4A7 227 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 TSTD3H0UI37 97 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 K7EP13 123 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 K7N7A8 449 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 M0QYV0 167 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 FCN1O00602 326 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 CDIPTO14735 213 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 RGS16O15492 202 aaPredicted RBP3.07□□□□□ -1.92
CCDC54-201ENST00000261058 HCRTR1O43613 425 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 SOX15O60248 233 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 AQP8O94778 261 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 LALBAP00709 142 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 TCRBP04435 133 aa3.07□□□□□ -1.92
CCDC54-201ENST00000261058 RHOCP08134 193 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms