RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 C5orf34Q96MH7 638 aa10.18□□□□□ -0.78
TROAP-201ENST00000257909 FAM206AQ9NX38 181 aa10.18□□□□□ -0.78
TROAP-201ENST00000257909 CPAMD8Q8IZJ3 1885 aa10.18□□□□□ -0.78
TROAP-201ENST00000257909 C2orf16Q68DN1 1984 aa10.18□□□□□ -0.78
TROAP-201ENST00000257909 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 FAM221BA6H8Z2 402 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 PPP1R2P9O14990 202 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 KNG1P01042 644 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 PTGER4P35408 488 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 SNU13P55769 128 aaKnown RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 CSNK2A1P68400 391 aaPredicted RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 RSU1Q15404 277 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 HIST2H3PS2Q5TEC6 136 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 GPR157Q5UAW9 335 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 TTLL10Q6ZVT0 673 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 LINC00346Q8IVM7 164 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 SGPP2Q8IWX5 399 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 TMEM104Q8NE00 496 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 CSNK2A3Q8NEV1 391 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 OR13D1Q8NGV5 346 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 SLC25A43Q8WUT9 341 aaPredicted RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 RNF133Q8WVZ7 376 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 MEGF10Q96KG7 1140 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 URM1Q9BTM9 101 aaKnown RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 ST6GALNAC5Q9BVH7 336 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 CENPMQ9NSP4 180 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 UNC80Q8N2C7 3258 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 REV3LO60673 3130 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 CXorf65A6NEN9 183 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 A6NIZ1 184 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 MASP2O00187 686 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 HCRTR2O43614 444 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 RAD51DO75771 328 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 ZNF20P17024 532 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 FHITP49789 147 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 SEC13P55735 322 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 RAP1BP61224 184 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 FOXK1P85037 733 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 ZNF776Q68DI1 518 aaPredicted RBP10.17□□□□□ -0.78
TROAP-201ENST00000257909 OOSP2Q86WS3 158 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 MFSD8Q8NHS3 518 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 ARHGAP5-AS1Q96IT6 56 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 KLHDC3Q9BQ90 382 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 PBOV1Q9GZY1 135 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.17□□□□□ -0.78
TROAP-201ENST00000257909 HRASLS2Q9NWW9 162 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 CLDN16Q9Y5I7 305 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 TMEM131Q92545 1883 aa10.17□□□□□ -0.78
TROAP-201ENST00000257909 SDCBPO00560 298 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 PLPP3O14495 311 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 GMFGO60234 142 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 GPR137BO60478 399 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 CLPSP04118 112 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 GP1BBP13224 206 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 GALNSP34059 522 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 TSPAN7P41732 249 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 AFF3P51826 1226 aaKnown RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 HSD17B7P56937 341 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 NFATC4Q14934 902 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 ELOBQ15370 118 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 SSX2Q16385 188 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIKESHIQ53FT3 197 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 GGNBP1Q5YKI7 109 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 ZNF248Q8NDW4 579 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 C1orf147Q96MC9 270 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 SIRT7Q9NRC8 400 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 MMP24Q9Y5R2 645 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 A0A087X0M5 115 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 A0A1B0GWJ7 208 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 A0A1B0GX30 115 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 PRKNO60260 465 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BKO60814 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 SCGB1D2O95969 90 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BJP06899 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 PGCP20142 388 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 BCKDHBP21953 392 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BOP23527 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BBP33778 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BDP58876 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BCP62807 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 NKX6-1P78426 367 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 HSD11B2P80365 405 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 NOGQ13253 232 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 ERV3-1Q14264 604 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 UBE2V2Q15819 145 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST2H2BEQ16778 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 C21orf62-AS1Q17RA5 79 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 CHRFAM7AQ494W8 412 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 LCN10Q6JVE6 187 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 SULF2Q8IWU5 870 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST3H2BBQ8N257 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 TMEM156Q8N614 296 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BHQ93079 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 TSACCQ96A04 125 aaPredicted RBP10.16□□□□□ -0.78
TROAP-201ENST00000257909 NTNG2Q96CW9 530 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 WDR92Q96MX6 357 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BNQ99877 126 aa10.16□□□□□ -0.78
TROAP-201ENST00000257909 HIST1H2BMQ99879 126 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms