RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ECI1P42126 302 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 GPR3P46089 330 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 AFF3P51826 1226 aaKnown RBP18.13■□□□□ 0.49
RARA-201ENST00000254066 ADPRHP54922 357 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 EGR4Q05215 589 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 GPR157Q5UAW9 335 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 UNQ6494/PRO21346Q6UXR6 183 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 ARHGEF39Q8N4T4 335 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 OR13C9Q8NGT0 318 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 SLC25A43Q8WUT9 341 aaPredicted RBP18.13■□□□□ 0.49
RARA-201ENST00000254066 HPSE2Q8WWQ2 592 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 G6PC2Q9NQR9 355 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 MRPL22Q9NWU5 206 aaKnown RBP18.13■□□□□ 0.49
RARA-201ENST00000254066 OR52A1Q9UKL2 312 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 E5RGE8 158 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 DVL1O14640 695 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 HNF4GQ14541 408 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 LILRA6Q6PI73 481 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.13■□□□□ 0.49
RARA-201ENST00000254066 TTLL10Q6ZVT0 673 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 B3GALT5Q9Y2C3 310 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 NSG2Q9Y328 171 aa18.13■□□□□ 0.49
RARA-201ENST00000254066 COL6A3P12111 3177 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 MASP2O00187 686 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 LATO43561 262 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 RBMXP38159 391 aaKnown RBP18.12■□□□□ 0.49
RARA-201ENST00000254066 AADACL3Q5VUY0 350 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 RABEPKQ7Z6M1 372 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 MFSD8Q8NHS3 518 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 FNDC9Q8TBE3 224 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 RNASEH2CQ8TDP1 164 aaKnown RBP18.12■□□□□ 0.49
RARA-201ENST00000254066 KTI12Q96EK9 354 aaPredicted RBP18.12■□□□□ 0.49
RARA-201ENST00000254066 PRO1933Q9H354 126 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 PRR13Q9NZ81 148 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 PRODH2Q9UF12 536 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 MTCH2Q9Y6C9 303 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 IGLV1-36A0A0B4J1U3 117 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 PRSS37A4D1T9 235 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 ZNF860A6NHJ4 632 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 H3BQ15 152 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 IFNA21P01568 189 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 CXCL1P09341 107 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 TAGLN2P37802 199 aaKnown RBP18.12■□□□□ 0.49
RARA-201ENST00000254066 EMP2P54851 167 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.12■□□□□ 0.49
RARA-201ENST00000254066 DEGS2Q6QHC5 323 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 PARP12Q9H0J9 701 aaKnown RBP18.12■□□□□ 0.49
RARA-201ENST00000254066 FANCMQ8IYD8 2048 aa18.12■□□□□ 0.49
RARA-201ENST00000254066 SMCO3A2RU48 225 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 PRH1P02810 166 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 HIST1H1DP16402 221 aaKnown RBP18.11■□□□□ 0.49
RARA-201ENST00000254066 MSX1P28360 303 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 TAS2R46P59540 309 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 KIR2DS3Q14952 304 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 JOSD1Q15040 202 aaPredicted RBP18.11■□□□□ 0.49
RARA-201ENST00000254066 GRASPQ7Z6J2 395 aaPredicted RBP18.11■□□□□ 0.49
RARA-201ENST00000254066 OR4C3Q8NH37 302 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 RAB39BQ96DA2 213 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 LRIT1Q9P2V4 623 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 EMC9Q9Y3B6 208 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 LINC01553A4QN01 128 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 K7EQS6 105 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 GPR137BO60478 399 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 ADH5P11766 374 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 IL2RGP31785 369 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 AKR1C8PQ5T2L2 129 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 OR2T2Q6IF00 324 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 FOXRED2Q8IWF2 684 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 CA13Q8N1Q1 262 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 OR13G1Q8NGZ3 307 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 RCC1LQ96I51 464 aaKnown RBP18.11■□□□□ 0.49
RARA-201ENST00000254066 PACRGQ96M98 296 aaPredicted RBP18.11■□□□□ 0.49
RARA-201ENST00000254066 WDR92Q96MX6 357 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 SMIM3Q9BZL3 60 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 MBNL1Q9NR56 388 aaKnown RBP18.11■□□□□ 0.49
RARA-201ENST00000254066 SRPK3Q9UPE1 567 aa18.11■□□□□ 0.49
RARA-201ENST00000254066 HSBP1L1C9JCN9 74 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 FABP4P15090 132 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 UBE2KP61086 200 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 DGAT2L6Q6ZPD8 337 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 C9orf40Q8IXQ3 194 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 LPAR5Q9H1C0 372 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 C14orf166Q9Y224 244 aaKnown RBP18.1■□□□□ 0.49
RARA-201ENST00000254066 SLC17A4Q9Y2C5 497 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 B4DEV8 164 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 C9J4A7 227 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 RAMP1O60894 148 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 GLIPR1P48060 266 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 ERGIC1Q969X5 290 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 ASCL3Q9NQ33 180 aa18.1■□□□□ 0.49
RARA-201ENST00000254066 TMEM269A0A1B0GVZ9 245 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 RBFOX3A6NFN3 312 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 A8MVM7 634 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 K7N7A8 449 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 CBR3O75828 277 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 PI3P19957 117 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 OR3A2P47893 321 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 RAB38P57729 211 aa18.09■□□□□ 0.49
RARA-201ENST00000254066 RPL27P61353 136 aaKnown RBP18.09■□□□□ 0.49
RARA-201ENST00000254066 OR8G1Q15617 311 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms