RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SERPINA2P20848 420 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 OTX2P32243 289 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 NPY4RP50391 375 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 ZNF84P51523 738 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 ARFRP1Q13795 201 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 ATXN7L3Q14CW9 347 aaPredicted RBP17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 BEX5Q5H9J7 111 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAM27BQ5VT28 67 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 ST8SIA2Q92186 375 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 PIGTQ969N2 578 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 LINC00052Q96N35 136 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 C5orf66Q9H5L9 145 aa17.11■□□□□ 0.33
CDC42EP1-201ENST00000249014 PCSK5Q92824 1860 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 FCGR2AP12318 317 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 RAC3P60763 192 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 MRPS34P82930 218 aaKnown RBP17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 EIF3IQ13347 325 aaKnown RBP17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 ZNF345Q14585 488 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 GGNQ86UU5 652 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 ARRDC1Q8N5I2 433 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 RELL2Q8NC24 303 aaPredicted RBP17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 PP6455Q8WZ26 134 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 TMEM230Q96A57 120 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 INTS12Q96CB8 462 aaKnown RBP17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 SGCZQ96LD1 299 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 GPR132Q9UNW8 380 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 PCDHGA1Q9Y5H4 931 aa17.1■□□□□ 0.33
CDC42EP1-201ENST00000249014 M6PRP20645 277 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 SRD5A2P31213 254 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 FAM189A2Q15884 450 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 SLC23A3Q6PIS1 610 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 SGK3Q96BR1 496 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 VRK1Q99986 396 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 ST6GALNAC5Q9BVH7 336 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 GHRLQ9UBU3 117 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 FLVCR1Q9Y5Y0 555 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 PMS2P1A4D2B8 440 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 GJE1A6NN92 205 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 EEF1E1-BLOC1S5C9J1V9 151 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR2F2O95006 317 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 P04436 131 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 BLVRBP30043 206 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR2F1Q13607 317 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 LPAL2Q16609 132 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 ACTBL2Q562R1 376 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 SLC16A14Q7RTX9 510 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR14L1PQ8NHC6 308 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 MAFIPQ8WZ33 124 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 HAS2Q92819 552 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 SF3B5Q9BWJ5 86 aaKnown RBP17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 TCFL5Q9UL49 500 aa17.09■□□□□ 0.33
CDC42EP1-201ENST00000249014 CCDC187A0A096LP49 1063 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 CEACAM18A8MTB9 384 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 HPNP05981 417 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 PI3P19957 117 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 AMY2BP19961 511 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 ZP3P21754 424 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 CRYGSP22914 178 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 UBA52P62987 128 aaKnown RBP17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 HGFACQ04756 655 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 TMEM128Q5BJH2 165 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 C1orf210Q8IVY1 113 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 PDZD9Q8IXQ8 264 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR5H2Q8NGV7 314 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 OR2AE1Q8NHA4 323 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 SPTSSAQ969W0 71 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 PECRQ9BY49 303 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 CRLF2Q9HC73 371 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 COQ3Q9NZJ6 369 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 PFDN2Q9UHV9 154 aa17.08■□□□□ 0.33
CDC42EP1-201ENST00000249014 LRRC3CA6NJW4 275 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 ACKR3P25106 362 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 DLSTP36957 453 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 TAS2R31P59538 309 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 BAMBIQ13145 260 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 FAM74A1Q5RGS3 127 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 OR13G1Q8NGZ3 307 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 ROBO4Q8WZ75 1007 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZNF75AQ96N20 296 aa17.08■□□□□ 0.32
CDC42EP1-201ENST00000249014 KANTRA0A1W2PQU2 76 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 ZNF716A6NP11 495 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 A8MXK9 166 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 B4E171 279 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 SDCBPO00560 298 aaPredicted RBP17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 KCNAB3O43448 404 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 BCL2L11O43521 198 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 MTRF1O75570 445 aaKnown RBP17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 HPP00738 406 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 TCN2P20062 427 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 SERPINF1P36955 418 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 TSPAN7P41732 249 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 STARP49675 285 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 SNU13P55769 128 aaKnown RBP17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 CARD18P57730 90 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 CHAF1BQ13112 559 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 DCAF12Q5T6F0 453 aa17.07■□□□□ 0.32
CDC42EP1-201ENST00000249014 AADACL3Q5VUY0 350 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms