RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ARPC5LQ9BPX5 153 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 EHFQ9NZC4 300 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 PIGLQ9Y2B2 252 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 SCGNO76038 276 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 GUCA1AP43080 201 aaPredicted RBP22.42■■□□□ 1.18
RAB40C-201ENST00000248139 GSK3AP49840 483 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 ZNF468Q5VIY5 522 aaPredicted RBP22.42■■□□□ 1.18
RAB40C-201ENST00000248139 C6orf201Q7Z4U5 140 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 MR1Q95460 341 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 SHDQ96IW2 340 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 FAM117AQ9C073 453 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 ZNF701Q9NV72 531 aaPredicted RBP22.42■■□□□ 1.18
RAB40C-201ENST00000248139 GSKIPQ9P0R6 139 aa22.42■■□□□ 1.18
RAB40C-201ENST00000248139 HPNP05981 417 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 UMODP07911 640 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 HOXB5P09067 269 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 PATE4P0C8F1 98 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 MSR1P21757 451 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 GABRR1P24046 479 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 MC2RQ01718 297 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 SNAI3Q3KNW1 292 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 FAHD2BQ6P2I3 314 aaPredicted RBP22.41■■□□□ 1.18
RAB40C-201ENST00000248139 SSC4DQ8WTU2 575 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 FAHD2AQ96GK7 314 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 URM1Q9BTM9 101 aaKnown RBP22.41■■□□□ 1.18
RAB40C-201ENST00000248139 LDAHQ9H6V9 325 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 ACKR4Q9NPB9 350 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 WNT16Q9UBV4 365 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 CCL1P22362 96 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 NKAPLQ5M9Q1 402 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 DRAM2Q6UX65 266 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 TMED6Q8WW62 240 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 PROK2Q9HC23 129 aa22.41■■□□□ 1.18
RAB40C-201ENST00000248139 TP53I11O14683 189 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 TNFSF11O14788 317 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 TLX3O43711 291 aaPredicted RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 CD63P08962 238 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 ADAT1Q9BUB4 502 aaKnown RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 DUSP23Q9BVJ7 150 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 METTL8Q9H825 291 aaKnown RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 OR2S2Q9NQN1 319 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 PLEK2Q9NYT0 353 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 FLVCR1Q9Y5Y0 555 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 ATP6V1G2-DDX39BF2Z307 99 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 ANGPTL7O43827 346 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 GRB2P62993 217 aaKnown RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 SRSF3P84103 164 aaKnown RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 H3F3AP84243 136 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 CHAF1BQ13112 559 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 SLC25A43Q8WUT9 341 aaPredicted RBP22.4■■□□□ 1.18
RAB40C-201ENST00000248139 PIK3IP1Q96FE7 263 aa22.4■■□□□ 1.18
RAB40C-201ENST00000248139 NPIPA2E9PIF3 369 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 NPIPA3F8WFD2 350 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 CFIP05156 583 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 TBPP20226 339 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 EIF1P41567 113 aaKnown RBP22.39■■□□□ 1.18
RAB40C-201ENST00000248139 KCNMB1Q16558 191 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 VAX1Q5SQQ9 334 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 NABP1Q96AH0 204 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 GPR173Q9NS66 373 aa22.39■■□□□ 1.18
RAB40C-201ENST00000248139 PATE3B3GLJ2 98 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 ZIC3O60481 467 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 SFT2D2O95562 160 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 NAT1P18440 290 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 PNLDC1Q8NA58 520 aaKnown RBP22.39■■□□□ 1.17
RAB40C-201ENST00000248139 IFI44Q8TCB0 444 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 FBXO17Q96EF6 278 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 OCSTAMPQ9BR26 566 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 PECRQ9BY49 303 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 NELFAQ9H3P2 528 aa22.39■■□□□ 1.17
RAB40C-201ENST00000248139 MCTS1Q9ULC4 181 aaKnown RBP22.39■■□□□ 1.17
RAB40C-201ENST00000248139 ECH1Q13011 328 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 BRICD5Q6PL45 260 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 ZC4H2Q9NQZ6 224 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 SIT1Q9Y3P8 196 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 RIPPLY1Q0D2K3 151 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 GTPBP8Q8N3Z3 284 aaPredicted RBP22.38■■□□□ 1.17
RAB40C-201ENST00000248139 ARRDC1Q8N5I2 433 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 GJC3Q8NFK1 279 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM231Q9H6L2 316 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 ANAPC10Q9UM13 185 aa22.38■■□□□ 1.17
RAB40C-201ENST00000248139 IGHV1-45A0A0A0MS14 117 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 A0A0J9YW62 118 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 BET1O15155 118 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 RAB32Q13637 225 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 NUDT16L1Q9BRJ7 211 aaKnown RBP22.37■■□□□ 1.17
RAB40C-201ENST00000248139 DNASE2O00115 360 aaPredicted RBP22.37■■□□□ 1.17
RAB40C-201ENST00000248139 ZNHIT1O43257 154 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 NTF4P34130 210 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 TAS2R31P59538 309 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 C20orf196Q8IYI0 205 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 OR9K2Q8NGE7 335 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 CDC6Q99741 560 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 SRXN1Q9BYN0 137 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 CYTL1Q9NRR1 136 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 PRELID1Q9Y255 219 aa22.37■■□□□ 1.17
RAB40C-201ENST00000248139 M0R135 149 aa22.36■■□□□ 1.17
RAB40C-201ENST00000248139 SPRY1O43609 319 aaPredicted RBP22.36■■□□□ 1.17
RAB40C-201ENST00000248139 TMEM156Q8N614 296 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms