RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 C1QL2Q7Z5L3 287 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 CCDC36Q8IYA8 594 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 DCUN1D4Q92564 292 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 OR10A2Q9H208 303 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 PRR13Q9NZ81 148 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
HIF3A-202ENST00000244303 TP53I11O14683 189 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 FLI1Q01543 452 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-202ENST00000244303 PCOLCEQ15113 449 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 SLC9A3R2Q15599 337 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 KISS1Q15726 138 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 CRIP3Q6Q6R5 217 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 OR51T1Q8NGJ9 327 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 OR5H2Q8NGV7 314 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 NMES1Q9C002 83 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF160Q9HCG1 818 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF175Q9Y473 711 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 IGHV3-15A0A0B4J1V0 119 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 F5H5K5 113 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 GP1BAP07359 652 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 AMY2BP19961 511 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 MSR1P21757 451 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 SLC6A9P48067 706 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 CSNK1A1P48729 337 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 LSM6P62312 80 aaKnown RBP12.64□□□□□ -0.39
HIF3A-202ENST00000244303 CLEC18BQ6UXF7 455 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 DTX1Q86Y01 620 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 MAML2Q8IZL2 1156 aaPredicted RBP12.64□□□□□ -0.39
HIF3A-202ENST00000244303 PNLDC1Q8NA58 520 aaKnown RBP12.64□□□□□ -0.39
HIF3A-202ENST00000244303 ROBO4Q8WZ75 1007 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 ST6GALNAC5Q9BVH7 336 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 SLC39A1Q9NY26 324 aa12.64□□□□□ -0.39
HIF3A-202ENST00000244303 DMDP11532 3685 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 OR5H15A6NDH6 313 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 STMND1H3BQB6 276 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 MTRF1O75570 445 aaKnown RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 ADAP1O75689 374 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 SFT2D2O95562 160 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 IGLV3-1P01715 115 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 FKBP2P26885 142 aaKnown RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 GUCA1AP43080 201 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 H3F3AP84243 136 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 ECH1Q13011 328 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 IL11RAQ14626 422 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 PEAR1Q5VY43 1037 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 OR5AP2Q8NGF4 316 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 OR13G1Q8NGZ3 307 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 MAFIPQ8WZ33 124 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 ZNF385AQ96PM9 386 aaKnown RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 NELFAQ9H3P2 528 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 FLVCR1Q9Y5Y0 555 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 H7C2Y5 167 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 SDCBPO00560 298 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 ABCD4O14678 606 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 HTR3BO95264 441 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 PRF1P14222 555 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 SERPINA2P20848 420 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 CTSSP25774 331 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 PTGFRP43088 359 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 AKR1D1P51857 326 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 SUPT4H1P63272 117 aaKnown RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 ENDOGQ14249 297 aaKnown RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 FAM189A2Q15884 450 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 GTPBP8Q8N3Z3 284 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 FAM89BQ8N5H3 189 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 GJC3Q8NFK1 279 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 PIK3IP1Q96FE7 263 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 GNRHR2Q96P88 292 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 RTBDNQ9BSG5 229 aaPredicted RBP12.63□□□□□ -0.39
HIF3A-202ENST00000244303 RNF126Q9BV68 326 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 FAM117AQ9C073 453 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 MLXQ9UH92 298 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 FRYLO94915 3013 aa12.63□□□□□ -0.39
HIF3A-202ENST00000244303 H0YIZ8 118 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 FAHP16930 419 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 FPR2P25090 351 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CBX5P45973 191 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 ZXDAP98168 799 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 UBE2V2Q15819 145 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 STK11Q15831 433 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 CCDC157Q569K6 752 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 PABPC1L2AQ5JQF8 200 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 AADACL3Q5VUY0 350 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 PEG10Q86TG7 708 aaKnown RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 LHFPL1Q86WI0 220 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 OR1S2Q8NGQ3 325 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 RRNAD1Q96FB5 475 aaKnown RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 UCN2Q96RP3 112 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 TSNAXQ99598 290 aaKnown RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 PCDHB10Q9UN67 800 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 TRBV6-7A0A0A0MS04 114 aa12.62□□□□□ -0.39
HIF3A-202ENST00000244303 TEX13DA0A0J9YY54 714 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 FOXI3A8MTJ6 420 aaPredicted RBP12.62□□□□□ -0.39
HIF3A-202ENST00000244303 G3V3Y1 287 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms