RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 MOB3CQ70IA8 216 aa17.13■□□□□ 0.33
SNRPA-201ENST00000243563 CLVS1Q8IUQ0 354 aaPredicted RBP17.13■□□□□ 0.33
SNRPA-201ENST00000243563 IGFBPL1Q8WX77 278 aa17.13■□□□□ 0.33
SNRPA-201ENST00000243563 PIGTQ969N2 578 aa17.13■□□□□ 0.33
SNRPA-201ENST00000243563 ADAT1Q9BUB4 502 aaKnown RBP17.13■□□□□ 0.33
SNRPA-201ENST00000243563 TPK1Q9H3S4 243 aa17.13■□□□□ 0.33
SNRPA-201ENST00000243563 CBLN4Q9NTU7 201 aa17.13■□□□□ 0.33
SNRPA-201ENST00000243563 TMEM100Q9NV29 134 aa17.13■□□□□ 0.33
SNRPA-201ENST00000243563 M0R233 179 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 SPRY3O43610 288 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 AIREO43918 545 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 GATBO75879 557 aaKnown RBP17.12■□□□□ 0.33
SNRPA-201ENST00000243563 IGHV1-46P01743 117 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 ADRA2CP18825 462 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 FGF9P31371 208 aaPredicted RBP17.12■□□□□ 0.33
SNRPA-201ENST00000243563 THBS2P35442 1172 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 SELENOVP59797 346 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 CTF1Q16619 201 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 PLCXD3Q63HM9 321 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 ANKRD13BQ86YJ7 626 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 SERPINA12Q8IW75 414 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 TRMT10AQ8TBZ6 339 aaKnown RBP17.12■□□□□ 0.33
SNRPA-201ENST00000243563 SPACA5Q96QH8 159 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 GFI1Q99684 422 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 RBM38Q9H0Z9 239 aaKnown RBP17.12■□□□□ 0.33
SNRPA-201ENST00000243563 ZCCHC4Q9H5U6 513 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 CEPT1Q9Y6K0 416 aa17.12■□□□□ 0.33
SNRPA-201ENST00000243563 CENPEQ02224 2701 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 IGKV1-27A0A075B6S5 117 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 VSTM5A8MXK1 200 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 GABARAPO95166 117 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 CD2P06729 351 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 FSTP19883 344 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 CALRP27797 417 aaKnown RBP17.11■□□□□ 0.33
SNRPA-201ENST00000243563 ZNF81P51508 661 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 NCS1P62166 190 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 HSD17B12Q53GQ0 312 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 UTS2BQ765I0 119 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 LRRTM1Q86UE6 522 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 ZDHHC23Q8IYP9 409 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 OR2Z1Q8NG97 314 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 OR1M1Q8NGA1 313 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 PP6455Q8WZ26 134 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 OR5P3Q8WZ94 311 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 C10orf35Q96D05 121 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 SSR3Q9UNL2 185 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 HECTD1Q9ULT8 2610 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 TANC2Q9HCD6 1990 aa17.11■□□□□ 0.33
SNRPA-201ENST00000243563 LOC100289279A0A1B0GTE1 492 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 PLSCR5A0PG75 271 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 SMIM30A4D0T7 59 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 DPPA5A6NC42 116 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 ATF1P18846 271 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 MAB21L1Q13394 359 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 OR8G1Q15617 311 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 AGAP6Q5VW22 663 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 DNAAF1Q8NEP3 725 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 OR13G1Q8NGZ3 307 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 TACC2O95359 2948 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 CSMD2Q7Z408 3487 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 C17orf100A8MU93 164 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 SULT1B1O43704 296 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 NCR1O76036 304 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 MAS1P04201 325 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 CLEC2LP0C7M8 214 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 GALP22466 123 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 MAPK3P27361 379 aaPredicted RBP17.1■□□□□ 0.33
SNRPA-201ENST00000243563 SSTR2P30874 369 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 CDKN1AP38936 164 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 VBP1P61758 197 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 SNRPD2P62316 118 aaKnown RBP17.1■□□□□ 0.33
SNRPA-201ENST00000243563 FOXB2Q5VYV0 432 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 NR2C2APQ86WQ0 139 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 ELMOD3Q96FG2 381 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 CACNG6Q9BXT2 260 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 DYNLRB1Q9NP97 96 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 MPC1Q9Y5U8 109 aa17.1■□□□□ 0.33
SNRPA-201ENST00000243563 C3orf80F5H4A9 247 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 RAF1P04049 648 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 SRMP19623 302 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 AZGP1P25311 298 aaKnown RBP17.09■□□□□ 0.33
SNRPA-201ENST00000243563 GPM6AP51674 278 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 CEACAM21Q3KPI0 293 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 PRAMEF6Q5VXH4 476 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 TGIF2LYQ8IUE0 185 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 OR52N4Q8NGI2 321 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 OR5D14Q8NGL3 314 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 FAIMQ9NVQ4 179 aa17.09■□□□□ 0.33
SNRPA-201ENST00000243563 NDUFS7O75251 213 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 HOXA4Q00056 320 aaPredicted RBP17.08■□□□□ 0.32
SNRPA-201ENST00000243563 FTMTQ8N4E7 242 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 ITLN1Q8WWA0 313 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 ITFG2Q969R8 447 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 RFT1Q96AA3 541 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 SORCS2Q96PQ0 1159 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 FOXJ3Q9UPW0 622 aa17.08■□□□□ 0.32
SNRPA-201ENST00000243563 FAM230AA0A1W2PPH8 454 aa17.07■□□□□ 0.32
SNRPA-201ENST00000243563 PQLC2LA1A4F0 135 aa17.07■□□□□ 0.32
SNRPA-201ENST00000243563 RAB3AP20336 220 aa17.07■□□□□ 0.32
SNRPA-201ENST00000243563 PPOXP50336 477 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms