RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 GJB5O95377 273 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 SOD3P08294 240 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 GLRA1P23415 457 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 CISD2Q8N5K1 135 aaKnown RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 SERINC2Q96SA4 455 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 NEU1Q99519 415 aa11.58□□□□□ -0.56
VAMP4-201ENST00000236192 CDCA3Q99618 268 aaPredicted RBP11.58□□□□□ -0.56
VAMP4-201ENST00000236192 H0Y8G0 127 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 TSPAN7P41732 249 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 RPS15AP62244 130 aaKnown RBP11.57□□□□□ -0.56
VAMP4-201ENST00000236192 DMBX1Q8NFW5 382 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 ADGRG7Q96K78 797 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 FAAP24Q9BTP7 215 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 TCFL5Q9UL49 500 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 NHSQ6T4R5 1651 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 CCL15-CCL14A0A0B4J2E2 113 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 FCN1O00602 326 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 RRP8O43159 456 aaKnown RBP11.57□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF737O75373 536 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 FGF19O95750 216 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 SRP14P37108 136 aaKnown RBP11.57□□□□□ -0.56
VAMP4-201ENST00000236192 ASCL1P50553 236 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 ELOBQ15370 118 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 CCL15Q16663 113 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 MFSD12Q6NUT3 480 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF774Q6NX45 483 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 RPS4Y2Q8TD47 263 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 PCM1Q15154 2024 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 STC2O76061 302 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 DANCRP0C864 163 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 DUSP8Q13202 625 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF740Q8NDX6 193 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 DNAJC5Q9H3Z4 198 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 CNTD2Q9H8S5 307 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 KIAA1324LA8MWY0 1029 aaPredicted RBP11.57□□□□□ -0.56
VAMP4-201ENST00000236192 LILRB3O75022 631 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 PGCP20142 388 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 THBS3P49746 956 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 RAB31Q13636 194 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 OR4D11Q8NGI4 311 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 OR51A2Q8NGJ7 313 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 EDARADDQ8WWZ3 215 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 NUDT16L1Q9BRJ7 211 aaKnown RBP11.57□□□□□ -0.56
VAMP4-201ENST00000236192 LRFN3Q9BTN0 628 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 GCM1Q9NP62 436 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 PSME4Q14997 1843 aa11.57□□□□□ -0.56
VAMP4-201ENST00000236192 LEFTY2O00292 366 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 NXPH3O95157 252 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 CHRNA7P36544 502 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 MALLQ13021 153 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 SLC38A9Q8NBW4 561 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 BANF2Q9H503 90 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 CLCF1Q9UBD9 225 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 SIGLEC7Q9Y286 467 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 PEX11BO96011 259 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 IGLV3-25P01717 112 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 HKR1P10072 659 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 RPS4Y1P22090 263 aaKnown RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 SP3Q02447 781 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 IL24Q13007 206 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 S100A7AQ86SG5 101 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 OR2C3Q8N628 320 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 OR52N4Q8NGI2 321 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 OR6C3Q9NZP0 311 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 A0A1W2PQ45 241 aaPredicted RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 A0A1W2PQY0 241 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 IGHV2-5P01817 119 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 CD5P06127 495 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 PLP1P60201 277 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 MORN1Q5T089 497 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 NIT1Q86X76 327 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 SLC5A6Q9Y289 635 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF860A6NHJ4 632 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 F8VVB4 439 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 F8VWA3 439 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 DOK2O60496 412 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 DCDP81605 110 aaKnown RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 FBLN7Q53RD9 439 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 TXNDC8Q6A555 127 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 ARHGEF39Q8N4T4 335 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 OR5C1Q8NGR4 320 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 ZCCHC14Q8WYQ9 949 aaKnown RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 MOB3AQ96BX8 217 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 SLC26A1Q9H2B4 701 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 C1QCP02747 245 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 LCATP04180 440 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 EFNA3P52797 238 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 OR52L2PQ8NGH6 319 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 PTPMT1Q8WUK0 201 aaPredicted RBP11.56□□□□□ -0.56
VAMP4-201ENST00000236192 PGLYRP3Q96LB9 341 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 RARRES2Q99969 163 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 COPS7AQ9UBW8 275 aa11.56□□□□□ -0.56
VAMP4-201ENST00000236192 ADRA2AP08913 450 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 DAP3P51398 398 aaKnown RBP11.55□□□□□ -0.56
VAMP4-201ENST00000236192 ACKR1Q16570 336 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 HLA-DRB5Q30154 266 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms