RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 PIPP12273 146 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 CPT2P23786 658 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 VHLP40337 213 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 CCR9P51686 369 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 AQP4P55087 323 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 CDH15P55291 814 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 MFGE8Q08431 387 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 KCNJ8Q15842 424 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 CYB5R2Q6BCY4 276 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 LHFPL3Q86UP9 236 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 ZDHHC23Q8IYP9 409 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 MUC20Q8N307 709 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 SPICQ8N5J4 248 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 Q8TCH9 128 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 PIGCQ92535 297 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 RORBQ92753 470 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 C10orf35Q96D05 121 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 RAB39BQ96DA2 213 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 FAM71F1Q96KD3 344 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 C4orf36Q96KX1 117 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 Q9H521 79 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 PLEKHA1Q9HB21 404 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 TRIM36Q9NQ86 728 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 ACOXLQ9NUZ1 547 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 ERVK13-1Q9NX77 482 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 DIMT1Q9UNQ2 313 aaKnown RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 SLC22A13Q9Y226 551 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 CAB39Q9Y376 341 aaPredicted RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 RRP15Q9Y3B9 282 aaKnown RBP9.53□□□□□ -0.88
SF3B6-201ENST00000233468 RHBDD3Q9Y3P4 386 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 NPTNQ9Y639 398 aa9.53□□□□□ -0.88
SF3B6-201ENST00000233468 IGHV4-61A0A0C4DH41 118 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 ISPDA4D126 451 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 A6NLC8 198 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 RRP9O43818 475 aaKnown RBP9.52□□□□□ -0.89
SF3B6-201ENST00000233468 FSTL3O95633 263 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 PTBP3O95758 552 aaKnown RBP9.52□□□□□ -0.89
SF3B6-201ENST00000233468 PNPP00491 289 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 IGLV3-1P01715 115 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 GNAO1P09471 354 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 OR12D2P58182 307 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 MVKQ03426 396 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 PRDX4Q13162 271 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 SMN1Q16637 294 aaKnown RBP9.52□□□□□ -0.89
SF3B6-201ENST00000233468 TMEM249Q2WGJ8 235 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 CLVS2Q5SYC1 327 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 C6orf52Q5T4I8 152 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 FDX2Q6P4F2 183 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 IZUMO2Q6UXV1 221 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 KRT74Q7RTS7 529 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 MOGAT3Q86VF5 341 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 STX19Q8N4C7 294 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 KLHL36Q8N4N3 616 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 OR2G2Q8NGZ5 317 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 FBLIM1Q8WUP2 373 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 LYZL4Q96KX0 146 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 TECTBQ96PL2 329 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 COMMD4Q9H0A8 199 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 NEK6Q9HC98 313 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 PLCXD1Q9NUJ7 323 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 RNF7Q9UBF6 113 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 PCDHB10Q9UN67 800 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 PIGLQ9Y2B2 252 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 MYRFQ9Y2G1 1151 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 WIPI2Q9Y4P8 454 aa9.52□□□□□ -0.89
SF3B6-201ENST00000233468 A0A096LNT2 108 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ZNF850A8MQ14 1090 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 TMEM178BH3BS89 294 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 P2RY10O00398 339 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 CD5LO43866 347 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 GATBO75879 557 aaKnown RBP9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ISG15P05161 165 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 GRPP07492 148 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 PCMT1P22061 227 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 CCL1P22362 96 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ACKR3P25106 362 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 MDH2P40926 338 aaKnown RBP9.51□□□□□ -0.89
SF3B6-201ENST00000233468 TGM4P49221 684 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 BTG1P62324 171 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ST3GAL4Q11206 333 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 MAB21L1Q13394 359 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ALKBH1Q13686 389 aaKnown RBP9.51□□□□□ -0.89
SF3B6-201ENST00000233468 CEACAM21Q3KPI0 293 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 CCDC58Q4VC31 144 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 TMEM155Q4W5P6 130 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 WDR38Q5JTN6 314 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 KCTD8Q6ZWB6 473 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ZNF676Q8N7Q3 588 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 BPIFB6Q8NFQ5 453 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 OR5A2Q8NGI9 324 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 GGHQ92820 318 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 MYDGFQ969H8 173 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 PELI1Q96FA3 418 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 RNF170Q96K19 258 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 GAL3ST1Q99999 423 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 ANKRD60Q9BZ19 345 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 RASSF4Q9H2L5 321 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 TREM2Q9NZC2 230 aa9.51□□□□□ -0.89
SF3B6-201ENST00000233468 PSORS1C1Q9UIG5 152 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms