RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 GDF15Q99988 308 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 SIRT3Q9NTG7 399 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-201ENST00000223398 UGT2A1Q9Y4X1 527 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 APC2O95996 2303 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 DFFBO76075 338 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 WDR38Q5JTN6 314 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 SLC22A18ASQ8N1D0 253 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 EDARADDQ8WWZ3 215 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 LIN37Q96GY3 246 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF416Q9BWM5 594 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 PCYT1BQ9Y5K3 369 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-201ENST00000223398 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 COL5A3P25940 1745 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-201ENST00000223398 CCL21O00585 134 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 CDKN2AP42771 156 aaKnown RBP16.47■□□□□ 0.23
CLIP2-201ENST00000223398 OR13C8Q8NGS7 320 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 PP6455Q8WZ26 134 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 FGF20Q9NP95 211 aaPredicted RBP16.47■□□□□ 0.23
CLIP2-201ENST00000223398 FLVCR2Q9UPI3 526 aa16.47■□□□□ 0.23
CLIP2-201ENST00000223398 TMEM30CPA0ZSE6 113 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 FGF11Q92914 225 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 DDOSTP39656 456 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF141Q15928 474 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 DUSP21Q9H596 190 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 TPRP12270 2363 aaKnown RBP16.46■□□□□ 0.23
CLIP2-201ENST00000223398 PIGPP57054 158 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 SNRPNP63162 240 aaKnown RBP16.46■□□□□ 0.23
CLIP2-201ENST00000223398 GUCA2AQ02747 115 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 TSEN54Q7Z6J9 526 aaKnown RBP16.46■□□□□ 0.23
CLIP2-201ENST00000223398 CSAG2Q9Y5P2 127 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 CROCCQ5TZA2 2017 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF205O95201 554 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 TMEM182Q6ZP80 229 aaPredicted RBP16.46■□□□□ 0.23
CLIP2-201ENST00000223398 OR10AD1Q8NGE0 317 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 PELI1Q96FA3 418 aa16.46■□□□□ 0.23
CLIP2-201ENST00000223398 A0A1W2PPV9 198 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 M0R1X1 148 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 SMIM18P0DKX4 95 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 HOXD11P31277 338 aaPredicted RBP16.45■□□□□ 0.22
CLIP2-201ENST00000223398 GPNMBQ14956 572 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 ETFDHQ16134 617 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 NTN4Q9HB63 628 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 TMEM200CA6NKL6 621 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 DTYMKP23919 212 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 FAM74A1Q5RGS3 127 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 UBE3DQ7Z6J8 389 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 ZFP62Q8NB50 900 aaPredicted RBP16.45■□□□□ 0.22
CLIP2-201ENST00000223398 PTPMT1Q8WUK0 201 aaPredicted RBP16.45■□□□□ 0.22
CLIP2-201ENST00000223398 DUS3LQ96G46 650 aaKnown RBP16.45■□□□□ 0.22
CLIP2-201ENST00000223398 RAB1BQ9H0U4 201 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 TRIP11Q15643 1979 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 LRP3O75074 770 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 NGFP01138 241 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 SP9P0CG40 484 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 CTLA4P16410 223 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 RAC3P60763 192 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 OSGIN2Q9Y236 505 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 DOCK5Q9H7D0 1870 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 RPS10-NUDT3A0A1W2PQS6 291 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 RPS10P46783 165 aaKnown RBP16.45■□□□□ 0.22
CLIP2-201ENST00000223398 PSG6Q00889 435 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 OR8U1Q8NH10 309 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
CLIP2-201ENST00000223398 BRWD3Q6RI45 1802 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 NEU3Q9UQ49 428 aa16.45■□□□□ 0.22
CLIP2-201ENST00000223398 NTN1O95631 604 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 CD82P27701 267 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 PSMB3P49720 205 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 ABHD3Q8WU67 409 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 ITPKCQ96DU7 683 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 IGHV3-43A0A0B4J1X8 118 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 OR2F2O95006 317 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 IGHV3-43DP0DP04 118 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 TGM1P22735 817 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 CSN1S1P47710 185 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 THSD4Q6ZMP0 1018 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 RPEQ96AT9 228 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 TUBAL3A6NHL2 446 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 NKX2-8O15522 239 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 CD1EP15812 388 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 ACKR3P25106 362 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 DCTDP32321 178 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 P2RX3P56373 397 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 MAMSTRQ6ZN01 415 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 C4orf45Q96LM5 186 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 GNG13Q9P2W3 67 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 BOLA1Q9Y3E2 137 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 FUT3P21217 361 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 OR4S1Q8NGB4 309 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 TAF9BQ9HBM6 251 aa16.44■□□□□ 0.22
CLIP2-201ENST00000223398 SNAPINO95295 136 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 SLC25A1P53007 311 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 SLC37A1P57057 533 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 KISS1Q15726 138 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 ADIRFQ15847 76 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 LYG1Q8N1E2 194 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
CLIP2-201ENST00000223398 TRAF3IP2O43734 574 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms