RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TWSG1Q9GZX9 223 aa13.21□□□□□ -0.29
UBE2D4-201ENST00000222402 A0A1B0GV50 99 aa13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 SPRY1O43609 319 aaPredicted RBP13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 UNC119Q13432 240 aa13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF169Q14929 603 aaPredicted RBP13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 CNTNAP3BQ96NU0 1288 aa13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 LPAR5Q9H1C0 372 aa13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 C1orf123Q9NWV4 160 aa13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF107Q9UII5 783 aaPredicted RBP13.21□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A0C4DFX4 3053 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A087WZY1 265 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 CEBPGP53567 150 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 C6orf201Q7Z4U5 140 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 RNF141Q8WVD5 230 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 AQP3Q92482 292 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 STRADBQ9C0K7 418 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 CRLF2Q9HC73 371 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 SYNGR4O95473 234 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 NME2P22392 152 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 PHLDA2Q53GA4 152 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 RTL6Q6ICC9 239 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 NFAM1Q8NET5 270 aaPredicted RBP13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 OR9K2Q8NGE7 335 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 MITD1Q8WV92 249 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 FLVCR1Q9Y5Y0 555 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 LOC102725191A0A1B0GVB3 256 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 PATE3B3GLJ2 98 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 MASP2O00187 686 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 CBR3O75828 277 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 DHRS3O75911 302 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 THBS4P35443 961 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 PNLIPRP3Q17RR3 467 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 DCAF12Q5T6F0 453 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 ABHD17BQ5VST6 288 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 BAP18Q8IXM2 172 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 PP6455Q8WZ26 134 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 GPR160Q9UJ42 338 aa13.2□□□□□ -0.3
UBE2D4-201ENST00000222402 K7EPK0 472 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 CNR1P21554 472 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 S100GP29377 79 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 RFC3P40938 356 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 RPS18P62269 152 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 IL11RAQ14626 422 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 FAM71E2Q8N5Q1 922 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 SYT3Q9BQG1 590 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 SHISA7A6NL88 538 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 MRPL33O75394 65 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 MED6O75586 246 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 CD79AP11912 226 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 PNLIPP16233 465 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 RBP2P50120 134 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 MALLQ13021 153 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 C20orf196Q8IYI0 205 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 BVESQ8NE79 360 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 OR52H1Q8NGJ2 320 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 REEP6Q96HR9 211 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 UTP23Q9BRU9 249 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 OR51B6Q9H340 312 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 PIGMQ9H3S5 423 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 IFNA2P01563 188 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 PVALBP20472 110 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 STARD6P59095 220 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 POC1BQ8TC44 478 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 PAPOLGQ9BWT3 736 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 TMEM231Q9H6L2 316 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 PCDHB10Q9UN67 800 aa13.19□□□□□ -0.3
UBE2D4-201ENST00000222402 SIGLEC5O15389 551 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 KLK2P20151 261 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 ZBTB25P24278 435 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 PLP2Q04941 152 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 SIGLEC14Q08ET2 396 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 RSPO4Q2I0M5 234 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 EMG1Q92979 244 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 B4GALT7Q9UBV7 327 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 UBE2J1Q9Y385 318 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 BORCS7-ASMTA0A0B4J1R7 106 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A1W2PNV4 684 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 EFNA2O43921 213 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 CRHP06850 196 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 ICAM2P13598 275 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 VAMP2P63027 116 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 PDCD1Q15116 288 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 TCEAL6Q6IPX3 200 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 RGS7BPQ6MZT1 257 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF774Q6NX45 483 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 BRICD5Q6PL45 260 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 GHRLQ9UBU3 117 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 CD74P04233 296 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF728P0DKX0 622 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 OR5H8P0DN80 308 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 RGS19P49795 217 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF133P52736 654 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 PCBD1P61457 104 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 WIPI1Q5MNZ9 446 aaPredicted RBP13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 CLEC18BQ6UXF7 455 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 SLC5A7Q9GZV3 580 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 B3GAT1Q9P2W7 334 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms