RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 SDHAF3Q9NRP4 125 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 MEMO1Q9Y316 297 aa19.5■□□□□ 0.71
HTATSF1-201ENST00000218364 MEX3AA1L020 520 aaKnown RBP19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 RNASEK-C17orf49H0YIS7 233 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 RER1O15258 196 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 CD5P06127 495 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 HKR1P10072 659 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 LPAR6P43657 344 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 SULT1A2P50226 295 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 ZNF84P51523 738 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 ZNF41P51814 821 aaPredicted RBP19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 CSNK2A1P68400 391 aaPredicted RBP19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 PDZK1IP1Q13113 114 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 AVPI1Q5T686 147 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 RPL7L1Q6DKI1 246 aaKnown RBP19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 CRIP3Q6Q6R5 217 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 CSNK2A3Q8NEV1 391 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 OR6X1Q8NH79 312 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 STT3BQ8TCJ2 826 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 THAP3Q8WTV1 239 aaPredicted RBP19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 EYSQ5T1H1 3165 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 LRP3O75074 770 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 HTR3BO95264 441 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 CRYBA1P05813 215 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 LTBRP36941 435 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 BTNL8Q6UX41 500 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 ANKRD37Q7Z713 158 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 OR51T1Q8NGJ9 327 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 EHFQ9NZC4 300 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 EXPH5Q8NEV8 1989 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 SDCBPO00560 298 aaPredicted RBP19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 DUX1O43812 170 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 FCGR3AP08637 254 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 NAT2P11245 290 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 HIST3H3Q16695 136 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 RXFP4Q8TDU9 374 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 C12orf57Q99622 126 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 FGF21Q9NSA1 209 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 PPP4R1LQ9P1A2 415 aa19.49■□□□□ 0.71
HTATSF1-201ENST00000218364 IGLV3-32A0A0A0MS00 114 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 NFYBP25208 207 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 TMEM268Q5VZI3 342 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 FAM57BQ71RH2 274 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 TSTD1Q8NFU3 115 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 MESP1Q9BRJ9 268 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 CA11O75493 328 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 IGLV3-1P01715 115 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 SPP1P10451 314 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 CTSSP25774 331 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 GRB2P62993 217 aaKnown RBP19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 ECH1Q13011 328 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 KMT5CQ86Y97 462 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 PNLDC1Q8NA58 520 aaKnown RBP19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 PECRQ9BY49 303 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 CNTNAP3Q9BZ76 1288 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 GSKIPQ9P0R6 139 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 POMT1Q9Y6A1 747 aa19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 ARID1BQ8NFD5 2236 aaPredicted RBP19.48■□□□□ 0.71
HTATSF1-201ENST00000218364 USP34Q70CQ2 3546 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 MED6O75586 246 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 CST4P01036 141 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 HOXB5P09067 269 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 SFTA3P0C7M3 94 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 ZNF708P17019 499 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 PTGFRP43088 359 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 S100A10P60903 97 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 SMAD4Q13485 552 aaKnown RBP19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 KISS1Q15726 138 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 ZNF283Q8N7M2 679 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 OR5B2Q96R09 309 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 PARP11Q9NR21 331 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 KLRF1Q9NZS2 232 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 LHX6Q9UPM6 363 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 IGLV3-12A0A075B6K2 115 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 SERPINE3A8MV23 424 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 FARS2O95363 451 aaKnown RBP19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 HPNP05981 417 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 HOXB1P14653 301 aaPredicted RBP19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 PTGDSP41222 190 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 B2MP61769 119 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 C1QL2Q7Z5L3 287 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 TM2D1Q9BX74 207 aa19.47■□□□□ 0.71
HTATSF1-201ENST00000218364 FBXO24O75426 580 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 PTGER4P35408 488 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 SPEM2Q0P670 501 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 RBM39Q14498 530 aaKnown RBP19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 ZNF239Q16600 458 aaKnown RBP19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 OXGR1Q96P68 337 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 C1orf123Q9NWV4 160 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 C2CD4DB7Z1M9 353 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 FAM157AC9JC47 383 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 IFNA2P01563 188 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 GAPDHP04406 335 aaKnown RBP19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 BLVRBP30043 206 aaPredicted RBP19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 NXPH1P58417 271 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 CARD17Q5XLA6 110 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 SLC16A14Q7RTX9 510 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 FAM219AQ8IW50 185 aa19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 CPNE2Q96FN4 548 aaPredicted RBP19.46■□□□□ 0.71
HTATSF1-201ENST00000218364 RNF122Q9H9V4 155 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms