RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TXNDC12O95881 172 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 EPPINO95925 133 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 SLC25A4P12235 298 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 FPR2P25090 351 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 C11orf91Q3C1V1 193 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 PRSS36Q5K4E3 855 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 MSRB3Q8IXL7 192 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 COMMD1Q8N668 190 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 UBAC2Q8NBM4 344 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 OR52N4Q8NGI2 321 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 C4orf45Q96LM5 186 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 VN1R1Q9GZP7 353 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 BARX1Q9HBU1 254 aaPredicted RBP12.17□□□□□ -0.46
SF3A1-201ENST00000215793 SPRY1O43609 319 aaPredicted RBP12.17□□□□□ -0.46
SF3A1-201ENST00000215793 NDUFB6O95139 128 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 S100A8P05109 93 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 HOXC4P09017 264 aaPredicted RBP12.17□□□□□ -0.46
SF3A1-201ENST00000215793 RAG2P55895 527 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 RNPS1Q15287 305 aaKnown RBP12.17□□□□□ -0.46
SF3A1-201ENST00000215793 LIMS2Q7Z4I7 341 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 WDFY2Q96P53 400 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 TGIF2Q9GZN2 237 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 SIRT5Q9NXA8 310 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 FAM96BQ9Y3D0 163 aa12.17□□□□□ -0.46
SF3A1-201ENST00000215793 KCNE1BA0A087WTH5 132 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 ALG1L2C9J202 215 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 AKR1C3P42330 323 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 METAP1P53582 386 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 PCBP4P57723 403 aaKnown RBP12.16□□□□□ -0.46
SF3A1-201ENST00000215793 OR1C1Q15619 314 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 C9orf50Q5SZB4 431 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 CD300LDQ6UXZ3 194 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 C17orf78Q8N4C9 275 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 FAM122AQ96E09 287 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 POM121L2Q96KW2 1035 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 AQP7P3A6NL99 342 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 HPP00738 406 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 NTF3P20783 257 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 GNB2P62879 340 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 WDR38Q5JTN6 314 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 C11orf87Q6NUJ2 197 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 ZNF574Q6ZN55 896 aaPredicted RBP12.16□□□□□ -0.46
SF3A1-201ENST00000215793 OR2A5Q96R48 311 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 C12orf10Q9HB07 376 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 CTSVO60911 334 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 WIPI1Q5MNZ9 446 aaPredicted RBP12.16□□□□□ -0.46
SF3A1-201ENST00000215793 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 OIT3Q8WWZ8 545 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
SF3A1-201ENST00000215793 AKR7A2O43488 359 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 CPN1P15169 458 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 GPM6AP51674 278 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 GUCA2AQ02747 115 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 MPPED2Q15777 294 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 HES7Q9BYE0 225 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 ADGRL4Q9HBW9 690 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 TMED3Q9Y3Q3 217 aa12.16□□□□□ -0.46
SF3A1-201ENST00000215793 DNAJC13O75165 2243 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 PGA3P0DJD8 388 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 OR2B8PP59922 312 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 PMP22Q01453 160 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 FABP9Q0Z7S8 132 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 ZNF561Q8N587 486 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 SIGLECL1Q8N7X8 197 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 PRRX2Q99811 253 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 RCL1Q9Y2P8 373 aaKnown RBP12.15□□□□□ -0.46
SF3A1-201ENST00000215793 MASP2O00187 686 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 COX7A2P2O60397 106 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 ZFPL1O95159 310 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 PAX6P26367 422 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 KISS1Q15726 138 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 TCTN1Q2MV58 587 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 SLC36A1Q7Z2H8 476 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 C2CD4CQ8TF44 421 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 TMEM18Q96B42 140 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 ADGRG7Q96K78 797 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 TINAGL1Q9GZM7 467 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-201ENST00000215793 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 LOXHD1Q8IVV2 1947 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 DHRS3O75911 302 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 CISD3P0C7P0 127 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 PRDX4Q13162 271 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 NECAP1Q8NC96 275 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 MRGPRX3Q96LB0 322 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 MTFP1Q9UDX5 166 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 AKAP11Q9UKA4 1901 aa12.15□□□□□ -0.46
SF3A1-201ENST00000215793 M0QZ24 198 aa12.15□□□□□ -0.47
SF3A1-201ENST00000215793 VMA21Q3ZAQ7 101 aa12.15□□□□□ -0.47
SF3A1-201ENST00000215793 TRILQ7L0X0 811 aa12.15□□□□□ -0.47
SF3A1-201ENST00000215793 LINC01555Q8NAE3 123 aa12.15□□□□□ -0.47
SF3A1-201ENST00000215793 GPBAR1Q8TDU6 330 aa12.15□□□□□ -0.47
SF3A1-201ENST00000215793 ADAMTSL3P82987 1691 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 DBX1A6NMT0 343 aa12.14□□□□□ -0.47
SF3A1-201ENST00000215793 FGF7P21781 194 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms