RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 FOXC1Q12948 553 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 SSX1Q16384 188 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF774Q6NX45 483 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 BTF3L4Q96K17 158 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 ADGRG7Q96K78 797 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 C2orf50Q96LR7 162 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 ADAMTSL1Q8N6G6 1762 aa12.21□□□□□ -0.46
TGFBR3-201ENST00000212355 FRG2CA6NGY1 282 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 J3KRW8 73 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 HTRA4P83105 476 aaPredicted RBP12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 MSRB3Q8IXL7 192 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 SLC24A4Q8NFF2 622 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 VN1R1Q9GZP7 353 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 KIR2DS1A0A191URI9 304 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 RRP8O43159 456 aaKnown RBP12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 COX7A2P2O60397 106 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 GABRG2P18507 467 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 KIR2DS4P43632 304 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 WNT3P56703 355 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 KIR2DS1Q14954 304 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 RTL8BQ17RB0 113 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 STUMQ69YW2 141 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 RTL10Q7L3V2 364 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 EXD3Q8N9H8 876 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 OR10AC1Q8NH08 325 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 OR6S1Q8NH40 331 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 EID2BQ96D98 161 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 CTDSP1Q9GZU7 261 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 ECI1P42126 302 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 RAB13P51153 203 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 ERVFC1-1P60608 527 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 HES3Q5TGS1 186 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 LIMS2Q7Z4I7 341 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 TDHQ8IZJ6 230 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 FBXL14Q8N1E6 418 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 BOD1Q96IK1 185 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 CXorf58Q96LI9 332 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 OR2A14Q96R47 310 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF385DQ9H6B1 395 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 SSC5DA1L4H1 1573 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 A0A1W2PPC4 97 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 TIAL1Q01085 375 aaKnown RBP eCLIP12.2□□□□□ -0.469e-7■■■□□ 17.1
TGFBR3-201ENST00000212355 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 SKA3Q8IX90 412 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 MMP24Q9Y5R2 645 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 CD37P11049 281 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 HLA-BQ31612 363 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 EMC4Q5J8M3 183 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 MUC20Q8N307 709 aaPredicted RBP12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 TSPAN32Q96QS1 320 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 TEX101Q9BY14 249 aa12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.2□□□□□ -0.46
TGFBR3-201ENST00000212355 E5RGE8 158 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 K7EQM0 130 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 OR1L3Q8NH93 324 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 S1PR3Q99500 378 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 PRDM7Q9NQW5 492 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 NSG2Q9Y328 171 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 DBX1A6NMT0 343 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 LYZL6O75951 148 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 IL2RAP01589 272 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 RPL34P49207 117 aaKnown RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 THSD4Q6ZMP0 1018 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF573Q86YE8 665 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 MORN4Q8NDC4 146 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 TMEM37Q8WXS4 190 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 DYRK2Q92630 601 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 ARHGDIGQ99819 225 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 SLIRPQ9GZT3 109 aaKnown RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 TRBV5-4A0A0C4DH59 114 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 TNFRSF10CO14798 259 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 SIGLEC5O15389 551 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 ARR3P36575 388 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 SIGLEC14Q08ET2 396 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 RGP1Q92546 391 aaPredicted RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 C10orf90Q96M02 699 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 PLAC1Q9HBJ0 212 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 TRAPPC4Q9Y296 219 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 SPAG17Q6Q759 2223 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 HRKO00198 91 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 COL9A1P20849 921 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 SELENOPP49908 381 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 NAGKQ9UJ70 344 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 SCN1AP35498 2009 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 GALR2O43603 387 aaPredicted RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 GYPAP02724 150 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 GLB1P16278 677 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 CDKN2AP42771 156 aaKnown RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 CDC34P49427 236 aaPredicted RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 PPP1R1AQ13522 171 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 MRM1Q6IN84 353 aaKnown RBP12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 TMEM230Q96A57 120 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 VPS25Q9BRG1 176 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms