RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 CDC6Q99741 560 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SAV1Q9H4B6 383 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 MED9Q9NWA0 146 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 RP1L1Q8IWN7 2480 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 IGHV5-10-1A0A0J9YXX1 117 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 TLX3O43711 291 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 SERPINA5P05154 406 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 CCL3P10147 92 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SPINK2P20155 84 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 RRADP55042 308 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 TAF9Q16594 264 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 CHRFAM7AQ494W8 412 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 WDR74Q6RFH5 385 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 RABEPKQ7Z6M1 372 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 HOGA1Q86XE5 327 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 CBLN2Q8IUK8 224 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 TMEM156Q8N614 296 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 PIGLQ9Y2B2 252 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 PTRH2Q9Y3E5 179 aaKnown RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 ZNF705EA8MWA4 302 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 SPRY1O43609 319 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 ACTL6AO96019 429 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 UBE2V2Q15819 145 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 TMEM128Q5BJH2 165 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SLC25A47Q6Q0C1 308 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 DTWD2Q8NBA8 298 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 MARC2Q969Z3 335 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 OXGR1Q96P68 337 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 RNF126Q9BV68 326 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SLC2A8Q9NY64 477 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 F8W036 122 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 FARS2O95363 451 aaKnown RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 IL2RAP01589 272 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SLC25A4P12235 298 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 NME2P22392 152 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 CXCL12P48061 93 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 P2RY4P51582 365 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SUMO3P55854 103 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 BLOC1S1P78537 153 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 SP6Q3SY56 376 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 OR56B1Q8NGI3 324 aa7.29□□□□□ -1.24
CDC27-201ENST00000066544 BARX1Q9HBU1 254 aaPredicted RBP7.29□□□□□ -1.24
CDC27-201ENST00000066544 NPIPA2E9PIF3 369 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 NPIPA3F8WFD2 350 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 DNASE2O00115 360 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 FXYD4P59646 89 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 BAP18Q8IXM2 172 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 TDHQ8IZJ6 230 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 LYZL4Q96KX0 146 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 GPR132Q9UNW8 380 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 COL4A2P08572 1712 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 TEX13DA0A0J9YY54 714 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 ABCD4O14678 606 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 IGHV3-9P01782 118 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 RCC1P18754 421 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 PTGFRP43088 359 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 ID4P47928 161 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 DOK3Q7L591 496 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 KMT5CQ86Y97 462 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 NKX6-2Q9C056 277 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 MYOZ1Q9NP98 299 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 FLVCR1Q9Y5Y0 555 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 SNAPC5O75971 98 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 HPNP05981 417 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 CD37P11049 281 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 CCL4P13236 92 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 SUPT4H1P63272 117 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 PDSS1Q5T2R2 415 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 PGAP1Q75T13 922 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 OR6X1Q8NH79 312 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 PIK3IP1Q96FE7 263 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 TGIF2Q9GZN2 237 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 PNRC2Q9NPJ4 139 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 PLEKHJ1Q9NW61 149 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 HPF1Q9NWY4 346 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 A0A1B0GV50 99 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 TPT1P13693 172 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 FAM122CQ6P4D5 195 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 YRDCQ86U90 279 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 PUSL1Q8N0Z8 303 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 OR14K1Q8NGZ2 314 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 ULBP2Q9BZM5 246 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 LSM5Q9Y4Y9 91 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 MED19A0JLT2 244 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 MFNGO00587 321 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 GSTP1P09211 210 aaKnown RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 ZNF345Q14585 488 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 TSPO2Q5TGU0 170 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 ALKBH3Q96Q83 286 aaPredicted RBP7.28□□□□□ -1.24
CDC27-201ENST00000066544 FAM117AQ9C073 453 aa7.28□□□□□ -1.24
CDC27-201ENST00000066544 IGLV3-12A0A075B6K2 115 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 DHRS7CA6NNS2 312 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 MSR1P21757 451 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 MSX1P28360 303 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 MTCP1P56278 107 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 RPL7L1Q6DKI1 246 aaKnown RBP7.27□□□□□ -1.25
CDC27-201ENST00000066544 OR2A2Q6IF42 318 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 DKKL1Q9UK85 242 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 A0A1W2PNV4 684 aa7.27□□□□□ -1.25
CDC27-201ENST00000066544 M0R135 149 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms