RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Mbd2Q9Z2E1 414 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Igkv9-124A0A0G2JDR3 117 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Igkv6-29A0A0G2JEI6 115 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rnaset2aC0HKG5 259 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rnaset2bC0HKG6 259 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zfp977L7N2E7 438 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 CfpP11680 464 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 HexbP20060 536 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 FauP35545 74 aaKnown RBP13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cpt2P52825 658 aaKnown RBP13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cpne2P59108 548 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 SinhcafQ8C8M1 221 aaKnown RBP13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Slc38a2Q8CFE6 504 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rasgef1bQ8JZL7 473 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Spred2Q924S7 410 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 TMEM121BQ99MX7 572 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cmtm2aQ9DAR1 169 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 MyotQ9JIF9 496 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Slco1b2Q9JJL3 689 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 GltpQ9JL62 209 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tcea2Q9QVN7 299 aa13.3□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1039A2ARY0 319 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1205A2ATJ7 307 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1158A2BHP7 313 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vmn1r5B2RQT2 315 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Rabl2E9Q9D5 223 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 MstnO08689 376 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Hoxb3P09026 433 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Igf2P09535 180 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ackr3P56485 362 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Slc38a11Q3USY0 453 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Hs3st6Q5GFD5 342 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 4930512M02RikQ5SQK8 218 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr12Q60894 333 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Drd1Q61616 446 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Wdr48Q8BH57 676 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Shisa7Q8C3Q5 558 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 A930004D18RikQ8C8W7 157 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Samd7Q8C8Y5 445 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nhlrc3Q8CCH2 347 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Crtac1Q8R555 646 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr165Q8VFA2 313 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Mrpl41Q9CQN7 135 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Fam210bQ9D8B6 190 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Bola1Q9D8S9 137 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tmprss2Q9JIQ8 490 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Lmx1aQ9JKU8 382 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 C1galt1c1Q9JMG2 316 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tcrg-V7A0A0A6YYE8 116 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Usp36B1AQJ2 1098 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Wisp3D3Z5L9 354 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cox5bP19536 128 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cyb5aP56395 134 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 B3gnt4Q1RLK6 350 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gm14851Q5ERJ0 116 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Slc16a11Q5NC32 447 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Plpp1Q61469 283 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Pon3Q62087 354 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr885Q7TRE0 309 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Fam76bQ80XP8 339 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cggbp1Q8BHG9 167 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Arl6ip5Q8R5J9 188 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr849Q8VFF6 312 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Clec2fQ8VI21 196 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Slc27a4Q91VE0 643 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Lman2Q9DBH5 358 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ndufa9Q9DC69 377 aaKnown RBP13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gal3st1Q9JHE4 423 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Dmrt1Q9QZ59 374 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Adam18Q9R157 719 aa13.29□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gm16368A0A1Y7VNG9 144 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Kiaa1324A2AFS3 1009 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ajm1A2AJA9 974 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 BC035044E0CXF8 138 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Gm5407E9Q7Q1 248 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Omt2aF6ZJR3 104 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Irf1P15314 329 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Pcbp4P57724 403 aaKnown RBP13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Six5P70178 719 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 HgsnatQ3UDW8 656 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tubal3Q3UX10 446 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 BckdhbQ6P3A8 390 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Cpeb3Q7TN99 716 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr1135Q7TR42 310 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Edem2Q8BJT9 577 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Dzank1Q8C008 778 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Vmn1r211Q8R266 298 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Elac1Q8VEB6 362 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr830Q8VFJ5 315 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nudt21Q9CQF3 227 aaKnown RBP13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Ndufa6Q9CQZ5 131 aaKnown RBP13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 9230104L09RikQ9D264 133 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr943Q9EQ92 314 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Nat8Q9JIY7 227 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Olfr122W4VSP0 330 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Iglc4A0A0G2JEK5 104 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Zfp982A2A8Q4 368 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Tspan15F7BWT7 294 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Prr23a1G3UW32 258 aa13.28□□□□□ -0.28
Ushbp1-201ENSMUST00000049184 Wnt9bO35468 359 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms