RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Q80Y39 304 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Prrg4Q8BGN6 226 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fndc9Q8BJN4 226 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 NracQ8BNX7 165 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Aifm2Q8BUE4 373 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Nadk2Q8C5H8 452 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Vmn1r8Q8R2C2 303 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc35b3Q922Q5 369 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Emc3Q99KI3 261 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rassf1Q99MK9 340 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 PccbQ99MN9 541 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rab3bQ9CZT8 219 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tomm20Q9DCC8 145 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Lpar2Q9JL06 348 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc7a11Q9WTR6 502 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 MokQ9WVS4 420 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cldn13Q9Z0S4 211 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Sptbn2Q68FG2 2388 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm19410A0A140LJC7 2098 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ccdc9bA3KGF9 545 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr424E9Q0Q2 315 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 S1pr1O08530 382 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Bmi1P25916 324 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Drd4P51436 387 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 UqcrhP99028 89 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Them4Q3UUI3 230 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ube2fbQ3UWQ3 185 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 EgflamQ4VBE4 1017 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tle1Q62440 770 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Foxb1Q64732 325 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr107Q7TRK4 309 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr285Q7TS17 319 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Clec4a1Q80UI7 245 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Paqr8Q80ZE5 354 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Elmod2Q8BGF6 293 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cdadc1Q8BMD5 523 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 NrrosQ8BMT4 693 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Acp6Q8BP40 418 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Aph1aQ8BVF7 265 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc22a29Q8BWG6 551 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rps19bp1Q8C6B9 143 aaKnown RBP7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Las2Q8CB14 526 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 GnalQ8CGK7 381 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Dnajc22Q8CHS2 339 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 NraddQ8CJ26 228 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rnf121Q8R1Z9 327 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 TbccQ8VCN9 341 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 PpcsQ8VDG5 311 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1254Q8VFB1 314 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1447Q8VFX3 309 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Fdx2Q9CPW2 174 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Nup37Q9CWU9 326 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ppp1r27Q9D119 154 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Q9D4W2 315 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Praf2Q9JIG8 178 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tnfrsf19Q9JLL3 416 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tinf2Q9QXG9 341 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 NpffQ9WVA8 114 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 PtprbB2RU80 1998 aa7.66□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr896-ps1A0A1L1SRZ8 308 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm364A2AFI6 671 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 CtcflA2APF3 636 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm21981D3Z6Q6 369 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gpr31F8VQN3 319 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1425K7N659 312 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm5724L7N264 670 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Prl7a1O54830 266 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Brd7O88665 651 aaKnown RBP7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Spsb2O88838 264 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Arl6O88848 186 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Hoxb6P09023 224 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Csn1s1P19228 313 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 SnrpbP27048 231 aaKnown RBP7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Adam5Q3TTE0 751 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Slc25a26Q5U680 274 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mef2aQ60929 498 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr304Q7TS03 333 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Hyal5Q812F3 526 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Plppr1Q8BFZ2 325 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Cdhr3Q8BL00 831 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 C8gQ8VCG4 202 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mfsd4b1Q8VCV9 425 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1424Q8VFV1 313 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1426Q8VG74 311 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ca15Q99N23 324 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Rtn4rQ99PI8 473 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Sult1c2Q9D939 296 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Tas2r4Q9JKT3 297 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Acox1Q9R0H0 661 aaKnown RBP7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm28710A0A1B0GR31 962 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm42372A0A1B0GT27 204 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Ddi2A2ADY9 399 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Zfp345A2AQA1 561 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Olfr1179A2AUS6 307 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Mettl11bB2RXM4 283 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 SpxD3Z752 116 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm8127E9Q0P0 100 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Zfp995E9Q6M3 437 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Gm10097J3KMK7 105 aa7.65□□□□□ -1.18
Trim39-201ENSMUST00000042717 Zfp616J3QN14 987 aa7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms