RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Adrb2P18762 418 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 XylbQ3TNA1 551 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Lsm11Q8BUV6 361 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 PigmQ8C2R7 423 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Swsap1Q8VCI7 278 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr378Q8VGT2 314 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 MyotQ9JIF9 496 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Prl3c1Q9QUN5 212 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Dpy19l1A6X919 746 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Selenbp1P17563 472 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 HnrnpkP61979 463 aaKnown RBP14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Ufd1P70362 307 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Rnft2Q3UF64 445 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Znf436Q8BPP0 452 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Inpp5kQ8C5L6 468 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Mitd1Q8VDV8 249 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Asb10Q91ZT7 467 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Nudcd2Q9CQ48 157 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmem216Q9CQC4 141 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Mettl18Q9CZ09 362 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Tlnrd1Q9ERE8 362 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Plp2Q9R1Q7 152 aa14.69□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr1018A2ASV3 311 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Esp34G3UXG0 151 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Zfp954Q7TNU5 416 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Kctd9Q80UN1 339 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 NrrosQ8BMT4 693 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Lrp12Q8BUJ9 858 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 AfmidQ8K4H1 305 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Crb3Q8QZT4 113 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Nudt16l1Q8VHN8 211 aaKnown RBP14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Ms4a8Q99N10 290 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmem186Q9CR76 216 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Carhsp1Q9CR86 148 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm6890A2BG94 208 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Vmn1r152E9Q9N3 307 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm8660K7N6J2 305 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Vmn1r104L7N293 307 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Psmd4O35226 376 aaKnown RBP14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 MscO88940 201 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 FasP25446 327 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr18Q0VAX9 331 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Arhgap9Q1HDU4 648 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Hsf5Q5ND04 624 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Ly6eQ64253 130 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmeff1Q6PFE7 372 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Plekhm1Q7TSI1 1074 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Mogat2Q80W94 334 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Fn3krpQ8K274 309 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 MetrnlQ8VE43 311 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr732Q8VFT5 308 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Slc27a4Q91VE0 643 aaKnown RBP14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Eif2b1Q99LC8 305 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 IcaQ9DBD0 700 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Slco1a1Q9QXZ6 670 aa14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Klf5Q9Z0Z7 446 aaKnown RBP14.68□□□□□ -0.06
Shh-201ENSMUST00000002708 Ralgapa1Q6GYP7 2035 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Gm12355A2A4X6 163 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Vmn2r51L7N215 852 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Ear3O35290 156 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Map2k6P70236 334 aaKnown RBP14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Srsf3P84104 164 aaKnown RBP14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Npas1P97459 594 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Q3TEI4 1023 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 DbpQ60925 325 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Eif1axQ8BMJ3 144 aaKnown RBP14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Fam120cQ8C3F2 1091 aaKnown RBP14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 CmblQ8R1G2 245 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Vmn1r28Q8R2C9 302 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Rnf113a1Q8R3P8 341 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 RabepkQ8VCH5 380 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr1044Q8VGR9 314 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Pot1Q91WC1 640 aaKnown RBP14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 MrgprgQ91ZB5 289 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Magt1Q9CQY5 335 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Gfod2Q9CYH5 385 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 RangrfQ9JIB0 185 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Reep6Q9JM62 201 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Ak3Q9WTP7 227 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 FaimQ9WUD8 179 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Zfp81B8JJZ7 531 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr568E9Q554 313 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 FaimlJ3QPY3 178 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 BC117090L7N257 96 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Ascl4M0QW46 144 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Il2rgP34902 369 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Fthl17dQ3SXD1 176 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Bbs12Q5SUD9 708 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Vamp1Q62442 118 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Mc2rQ64326 296 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmem106cQ80VP8 260 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Ldlrad4Q8BWJ4 306 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 CenpxQ8C4X1 78 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr788Q8VFI0 311 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Olfr1497Q8VG11 314 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Fthl17Q99MX2 176 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Sgo1Q9CXH7 517 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Tmem138Q9D6G5 162 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Rp2Q9EPK2 347 aa14.67□□□□□ -0.06
Shh-201ENSMUST00000002708 Fbxo15Q9QZN0 433 aa14.67□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms