RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 CENPSQ8N2Z9 138 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 KDF1Q8NAX2 398 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 UBASH3BQ8TF42 649 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 AKAP1Q92667 903 aaKnown RBP eCLIP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 PIGTQ969N2 578 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 C10orf35Q96D05 121 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 C1orf147Q96MC9 270 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 SORCS2Q96PQ0 1159 aa15.19■□□□□ 0.02
PHGDH-232ENST00000641947 REPIN1Q9BWE0 567 aaKnown RBP15.19■□□□□ 0.02
PHGDH-232ENST00000641947 IGKV3-15P01624 115 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 HCKP08631 526 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 PRF1P14222 555 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 HOXB1P14653 301 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-232ENST00000641947 ARSBP15848 533 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 BMP5P22003 454 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 CDK2P24941 298 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 MAP2K3P46734 347 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 ART1P52961 327 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 QRFPP83859 136 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 TAB1Q15750 504 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 DCDC5Q6ZRR9 648 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 GCDHQ92947 438 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-232ENST00000641947 RFT1Q96AA3 541 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 FOXRED1Q96CU9 486 aaPredicted RBP15.18■□□□□ 0.02
PHGDH-232ENST00000641947 UQCC2Q9BRT2 126 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 ADGRG4Q8IZF6 3080 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 POLEQ07864 2286 aa15.18■□□□□ 0.02
PHGDH-232ENST00000641947 SSX4O60224 188 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 GMDSO60547 372 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 CTAG2O75638 210 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 KDM4BO94953 1096 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 ALDOBP05062 364 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 ERCC1P07992 297 aaPredicted RBP15.17■□□□□ 0.02
PHGDH-232ENST00000641947 CBR1P16152 277 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 PTH2RP49190 550 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 UNC119Q13432 240 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 OXA1LQ15070 435 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 TBC1D28Q2M2D7 210 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 PYHIN1Q6K0P9 492 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 LIX1LQ8IVB5 337 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 C17orf78Q8N4C9 275 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 TRIM63Q969Q1 353 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 ACACBO00763 2458 aa15.17■□□□□ 0.02
PHGDH-232ENST00000641947 ISPDA4D126 451 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 MAGEB3O15480 346 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 ALX3O95076 343 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 HLA-DQB1P01920 261 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 PTHLHP12272 177 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 Q6ZNX1 250 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 RELL2Q8NC24 303 aaPredicted RBP15.16■□□□□ 0.02
PHGDH-232ENST00000641947 OR56B2PQ8NGI1 322 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 RAB40AQ8WXH6 277 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 MRPS7Q9Y2R9 242 aaKnown RBP15.16■□□□□ 0.02
PHGDH-232ENST00000641947 IGKV1-27A0A075B6S5 117 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 TMEM8BA6NDV4 472 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 OR5H1A6NKK0 313 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 SPNP16150 400 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 NR4A2P43354 598 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 DGCR2P98153 550 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 KISS1Q15726 138 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 RNASE12Q5GAN4 147 aaKnown RBP15.16■□□□□ 0.02
PHGDH-232ENST00000641947 SPATA46Q5T0L3 261 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 MTFR2Q6P444 385 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 C1QL2Q7Z5L3 287 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 ANGPTL5Q86XS5 388 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 POC5Q8NA72 575 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 OR5D18Q8NGL1 313 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 S100PBPQ96BU1 408 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 TBCCD1Q9NVR7 557 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 SLC25A15Q9Y619 301 aa15.16■□□□□ 0.02
PHGDH-232ENST00000641947 COL6A6A6NMZ7 2263 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 LINC00854A0A1B0GVQ3 168 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 A8MXE2 369 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 MSTNO14793 375 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 ICMTO60725 284 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 SMPD2O60906 423 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 IGLV1-44P01699 117 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 VSIG8P0DPA2 414 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 HOXC12P31275 282 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 OPRM1P35372 400 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 ERVS71-1P61550 626 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 CLVS2Q5SYC1 327 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 AWAT2Q6E213 333 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 CDH26Q8IXH8 852 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 S100A16Q96FQ6 103 aaKnown RBP15.15■□□□□ 0.02
PHGDH-232ENST00000641947 GAL3ST1Q99999 423 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 AUNIPQ9H7T9 357 aa15.15■□□□□ 0.02
PHGDH-232ENST00000641947 MRPS28Q9Y2Q9 187 aaKnown RBP15.15■□□□□ 0.02
PHGDH-232ENST00000641947 ZNF816-ZNF321PA0A0X1KG74 233 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 EEF1E1-BLOC1S5C9J1V9 151 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 PLA2G10O15496 165 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 EEF1E1O43324 174 aaKnown RBP15.14■□□□□ 0.01
PHGDH-232ENST00000641947 LILRA1O75019 489 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 BPNT1O95861 308 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 CECR9P0C854 216 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 FAM157BP0CG42 384 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 CCKARP32238 428 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 TAS2R20P59543 309 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 RBPJQ06330 500 aa15.14■□□□□ 0.01
PHGDH-232ENST00000641947 FAM27E3Q08E93 113 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms