RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ANXA2P2	A6NMY6	339 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF670-ZNF695	F2Z2N8	137 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	EI24	O14681	340 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	HTR1F	P30939	366 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	ALDH3A2	P51648	485 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	IL5RA	Q01344	420 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	KCNJ8	Q15842	424 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	DCDC5	Q6ZRR9	648 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF826P	Q6ZT77	177 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	NLRC3	Q7RTR2	1065 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	C1QL2	Q7Z5L3	287 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	BOLL	Q8N9W6	283 aa	Known RBP	12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	C19orf18	Q8NEA5	215 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	DEFB108B	Q8NET1	73 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR8B3	Q8NGG8	313 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	ITPKC	Q96DU7	683 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	NEIL1	Q96FI4	390 aa	Predicted RBP	12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR8B2	Q96RD0	313 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	MICU1	Q9BPX6	476 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	PBOV1	Q9GZY1	135 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	PPP1R3E	Q9H7J1	279 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	ABCB9	Q9NP78	766 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	TRIM36	Q9NQ86	728 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	MMP26	Q9NRE1	261 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR5V1	Q9UGF6	321 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	OPN4	Q9UHM6	478 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	MPC1	Q9Y5U8	109 aa		12.57	□□□□□ -0.4
PHGDH-231	ENST00000641939	C3orf80	F5H4A9	247 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	LGALS8	O00214	317 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	TCF21	O43680	179 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	CST4	P01036	141 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF12	P17014	697 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	ADRA2C	P18825	462 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	GNB2	P62879	340 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	HOXA4	Q00056	320 aa	Predicted RBP	12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	EGR3	Q06889	387 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	POU4F2	Q12837	409 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF154	Q13106	437 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	PRDX4	Q13162	271 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	SFRP4	Q6FHJ7	346 aa	Predicted RBP	12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	WDR86	Q86TI4	376 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	C11orf53	Q8IXP5	236 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	GALNT4	Q8N4A0	578 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR1M1	Q8NGA1	313 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	FAM81A	Q8TBF8	368 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	TRUB1	Q8WWH5	349 aa	Known RBP	12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	PIGC	Q92535	297 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	ITFG2	Q969R8	447 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	APOL4	Q9BPW4	351 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	S100A14	Q9HCY8	104 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	IMPAD1	Q9NX62	359 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	NUFIP1	Q9UHK0	495 aa	Known RBP	12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	INSIG2	Q9Y5U4	225 aa		12.56	□□□□□ -0.4
PHGDH-231	ENST00000641939	TRAV38-1	A0A0B4J264	116 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	OOEP	A6NGQ2	149 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF850	A8MQ14	1090 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	LHB	P01229	141 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	EPHA1	P21709	976 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	CD80	P33681	288 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	PSMB10	P40306	273 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	MAP2K3	P46734	347 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	PITPNB	P48739	271 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	MFGE8	Q08431	387 aa	Predicted RBP	12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	TMED1	Q13445	227 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZIK1	Q3SY52	487 aa	Predicted RBP	12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	LIPN	Q5VXI9	398 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	LYPD2	Q6UXB3	125 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	COMMD2	Q86X83	199 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	CBR4	Q8N4T8	237 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	GCSAM	Q8N6F7	178 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	NANP	Q8TBE9	248 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR51E1	Q8TCB6	317 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR5P3	Q8WZ94	311 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	RFK	Q969G6	155 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	EME1	Q96AY2	570 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	HRASLS5	Q96KN8	279 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	TBX5	Q99593	518 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	C9orf16	Q9BUW7	83 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	RTL8A	Q9BWD3	113 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	OCEL1	Q9H607	264 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	MOB1A	Q9H8S9	216 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	RNPEPL1	Q9HAU8	725 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	GPR84	Q9NQS5	396 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	CLN8	Q9UBY8	286 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	MRM2	Q9UI43	246 aa	Known RBP	12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939		R4GMQ9	66 aa		12.55	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939		A0A1W2PQL4	384 aa	Predicted RBP	12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	TMEM210	A6NLX4	147 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939		E9PQ18	207 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	LOC110117498-PIK3R3	F6TDL0	507 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	MAGEB4	O15481	346 aa	Predicted RBP	12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	NDUFA2	O43678	99 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	SRSF10	O75494	262 aa	Known RBP	12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	IGLV3-1	P01715	115 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR2T7	P0C7T2	308 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	ATP6V1B1	P15313	513 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	ATP6V1E1	P36543	226 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	CSNK2B	P67870	215 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	SRSF2	Q01130	221 aa	Known RBP	12.54	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms