RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 UFSP2Q9NUQ7 469 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 ACOXLQ9NUZ1 547 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 SNX5Q9Y5X3 404 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 DAPL1A0PJW8 107 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 SNTNA6NMZ2 147 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 FAM20BO75063 409 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 ZNF205O95201 554 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 IGHA1P01876 353 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 PSMB10P40306 273 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 OR12D2P58182 307 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 PRSS35Q8N3Z0 413 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 ACBD7Q8N6N7 88 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 OR52I1Q8NGK6 324 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 ITPKCQ96DU7 683 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 FAM71F1Q96KD3 344 aaPredicted RBP22.43■■□□□ 1.18
VEGFA-231ENST00000640499 ZNF665Q9H7R5 613 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 MOB1AQ9H8S9 216 aa22.43■■□□□ 1.18
VEGFA-231ENST00000640499 NOP16Q9Y3C1 178 aaKnown RBP22.43■■□□□ 1.18
VEGFA-231ENST00000640499 IGHV2-5P01817 119 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 CAPGP40121 348 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 ACTC1P68032 377 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 ACTA1P68133 377 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 PRDX4Q13162 271 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 BCL2L15Q5TBC7 163 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 ZNF826PQ6ZT77 177 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 ZNF771Q7L3S4 317 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-231ENST00000640499 SPERTQ8NA61 448 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 PAPOLGQ9BWT3 736 aaKnown RBP22.42■■□□□ 1.18
VEGFA-231ENST00000640499 GNG8Q9UK08 70 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 GTF2A1LQ9UNN4 478 aa22.42■■□□□ 1.18
VEGFA-231ENST00000640499 RPL36Q9Y3U8 105 aaKnown RBP22.42■■□□□ 1.18
VEGFA-231ENST00000640499 ZNF850A8MQ14 1090 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 A8MV72 311 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-231ENST00000640499 IFNL4K9M1U5 179 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 P2RY10O00398 339 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 TGFAP01135 160 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 GRPP07492 148 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 THBS2P35442 1172 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 KIR3DL2P43630 455 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 BTG1P62324 171 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 WDR38Q5JTN6 314 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 LHFPL3Q86UP9 236 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 LINC01356Q8N9X3 169 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 HPSE2Q8WWQ2 592 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 OR5P3Q8WZ94 311 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 ERGIC1Q969X5 290 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 TMEM165Q9HC07 324 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 PCDHGB1Q9Y5G3 927 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 MPC1Q9Y5U8 109 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 SVEP1Q4LDE5 3571 aa22.41■■□□□ 1.18
VEGFA-231ENST00000640499 H0YAE9 185 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 MAP2K3P46734 347 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 RAB40BQ12829 278 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 PEG10Q86TG7 708 aaKnown RBP22.4■■□□□ 1.18
VEGFA-231ENST00000640499 SEMA6DQ8NFY4 1073 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 OR14K1Q8NGZ2 314 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 FBLIM1Q8WUP2 373 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 PIGCQ92535 297 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 TFAP2CQ92754 450 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 V9GYS6 101 aa22.4■■□□□ 1.18
VEGFA-231ENST00000640499 ISPDA4D126 451 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 DHRS3O75911 302 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 ATP6V1B1P15313 513 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 CCL1P22362 96 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 NANOS3P60323 173 aaKnown RBP22.39■■□□□ 1.17
VEGFA-231ENST00000640499 IL18R1Q13478 541 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 GALEQ14376 348 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 TMEM155Q4W5P6 130 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 DMRTC1Q5HYR2 192 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 C19orf18Q8NEA5 215 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 OR1M1Q8NGA1 313 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 OR8S1Q8NH09 359 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 PELI1Q96FA3 418 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 GAL3ST1Q99999 423 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 ISG20L2Q9H9L3 353 aaKnown RBP22.39■■□□□ 1.17
VEGFA-231ENST00000640499 FGF20Q9NP95 211 aaPredicted RBP22.39■■□□□ 1.17
VEGFA-231ENST00000640499 ERVK13-1Q9NX77 482 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 C2CD3Q4AC94 2353 aa22.39■■□□□ 1.17
VEGFA-231ENST00000640499 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-231ENST00000640499 ZNF816-ZNF321PA0A0X1KG74 233 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 LMX1BO60663 402 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 FADS2O95864 444 aaKnown RBP22.38■■□□□ 1.17
VEGFA-231ENST00000640499 FAHP16930 419 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 GNALP38405 381 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 ZNF154Q13106 437 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 ODF4Q2M2E3 257 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 FAM76BQ5HYJ3 339 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 FDX2Q6P4F2 183 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 KCTD20Q7Z5Y7 419 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 COMMD2Q86X83 199 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 OR2G2Q8NGZ5 317 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 ITFG2Q969R8 447 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 C4orf36Q96KX1 117 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 ALG8Q9BVK2 526 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 METTL17Q9H7H0 456 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-231ENST00000640499 FN3KRPQ9HA64 309 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 C14orf119Q9NWQ9 140 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 C1orf123Q9NWV4 160 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 FRRS1LQ9P0K9 344 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 PIGLQ9Y2B2 252 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms