RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CDKN1BP46527 198 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RGS4P49798 205 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RAB13P51153 203 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 CCR4P51679 360 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 H3F3AP84243 136 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ZNF616Q08AN1 781 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 FOXF1Q12946 379 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 MAD2L1Q13257 205 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 PMS2P3Q13401 168 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 TATDN3Q17R31 274 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ZNF718Q3SXZ3 478 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ACSBG2Q5FVE4 666 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ZNF771Q7L3S4 317 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ERASQ7Z444 233 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RNF130Q86XS8 419 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 C6orf223Q8N319 242 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 PRELID2Q8N945 189 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR9K2Q8NGE7 335 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 SLC26A7Q8TE54 656 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 P3H4Q92791 437 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 NEIL2Q969S2 332 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RNF157Q96PX1 679 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 GFI1Q99684 422 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 CENPKQ9BS16 269 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ALX4Q9H161 411 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 LRMDAQ9H2I8 198 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 METTL8Q9H825 291 aaKnown RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 LZTFL1Q9NQ48 299 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 DUSP22Q9NRW4 184 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 BCAP29Q9UHQ4 241 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 PPP1R3CQ9UQK1 317 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 PLLPQ9Y342 182 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 TBL2Q9Y4P3 447 aaKnown RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 V9GYY5 206 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 SORL1Q92673 2214 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 IGHV3-15A0A0B4J1V0 119 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 J3QR06 171 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 GMNNO75496 209 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 SERPINI2O75830 405 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RGS11O94810 467 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 NDUFB4O95168 129 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RAB36O95755 333 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 TTC4O95801 387 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 LGI1O95970 557 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 MT-ND1P03886 318 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 HIST1H2AGP0C0S8 130 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 CSNK2A2P19784 350 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 HOXA5P20719 270 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR3A4PP47883 348 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 SOX2P48431 317 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 FOXE3Q13461 319 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 CUL1Q13616 776 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 STK38Q15208 465 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 KRT31Q15323 416 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 CHI3L2Q15782 390 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RNASE12Q5GAN4 147 aaKnown RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 SPANXN2Q5MJ10 180 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 SIGLEC15Q6ZMC9 328 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 TMPRSS11FQ6ZWK6 438 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 AAED1Q7RTV5 226 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR7G2Q8NG99 324 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR4M1Q8NGD0 313 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR5D13Q8NGL4 314 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 TRMT10AQ8TBZ6 339 aaKnown RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ZNF582Q96NG8 517 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR4K3Q96R72 315 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 MNTQ99583 582 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 CHP1Q99653 195 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 ARHGDIGQ99819 225 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 LMF2Q9BU23 707 aaKnown RBP2.62□□□□□ -1.99
CCDC7-213ENST00000639290 MS4A8Q9BY19 250 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 OR51B6Q9H340 312 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 TMEM185BQ9H7F4 350 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 PPP1R3EQ9H7J1 279 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 MED20Q9H944 212 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 NEK6Q9HC98 313 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RDH8Q9NYR8 311 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 KAAG1Q9UBP8 84 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 RNF14Q9UBS8 474 aa2.62□□□□□ -1.99
CCDC7-213ENST00000639290 MARCH11A6NNE9 402 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 H3BSH0 61 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 SULT2B1O00204 365 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 EFNA2O43921 213 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 SAP30O75446 220 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 TBX6O95947 436 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-213ENST00000639290 MBD3O95983 291 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 CLPTM1O96005 669 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 IGLV1-51P01701 117 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 BCKDHAP12694 445 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 ZNF44P15621 663 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 CD1BP29016 333 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 GRIA1P42261 906 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 SSR2P43308 183 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 ILF2Q12905 390 aaKnown RBP2.61□□□□□ -1.99
CCDC7-213ENST00000639290 DLG1Q12959 904 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 STX5Q13190 355 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 UBE2V1Q13404 147 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 SLC17A1Q14916 467 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 CTSL3PQ5NE16 218 aa2.61□□□□□ -1.99
CCDC7-213ENST00000639290 C9orf135Q5VTT2 229 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms