RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 RCN1Q15293 331 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 OR8B8Q15620 311 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 OCLNQ16625 522 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 SLC25A30Q5SVS4 291 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 PRAMEF6Q5VXH4 476 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-209ENST00000635450 YIPF7Q8N8F6 280 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 PLPP7Q8NBV4 271 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 DVL3Q92997 716 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-209ENST00000635450 Q96MT0 163 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 RDH12Q96NR8 316 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 SIGLEC11Q96RL6 698 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 PAPOLGQ9BWT3 736 aaKnown RBP13.07□□□□□ -0.32
LINC00339-209ENST00000635450 PBOV1Q9GZY1 135 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 MOB1AQ9H8S9 216 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 FN3KRPQ9HA64 309 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 C8orf4Q9NR00 106 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 UFSP2Q9NUQ7 469 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 FAM206AQ9NX38 181 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 SMPD3Q9NY59 655 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-209ENST00000635450 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
LINC00339-209ENST00000635450 DOCK11Q5JSL3 2073 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 ANXA2P2A6NMY6 339 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 PRR32B1ATL7 298 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 E9PQ18 207 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
LINC00339-209ENST00000635450 MAP2K3P46734 347 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 LCN2P80188 198 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 TMEM155Q4W5P6 130 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 LIPNQ5VXI9 398 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-209ENST00000635450 GALNT4Q8N4A0 578 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 Q8TCH9 128 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 ABCB9Q9NP78 766 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 FAM118AQ9NWS6 357 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 NUFIP1Q9UHK0 495 aaKnown RBP13.06□□□□□ -0.32
LINC00339-209ENST00000635450 OPN4Q9UHM6 478 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 MPC1Q9Y5U8 109 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 SNX5Q9Y5X3 404 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 R4GMQ9 66 aa13.06□□□□□ -0.32
LINC00339-209ENST00000635450 PPIAL4EA0A075B759 164 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 A0A1W2PQL4 384 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-209ENST00000635450 A6NLC8 198 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 PPIAL4DF5H284 164 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 MAGEB4O15481 346 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-209ENST00000635450 FAM20BO75063 409 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 MTRF1O75570 445 aaKnown RBP13.05□□□□□ -0.32
LINC00339-209ENST00000635450 RPP14O95059 124 aaKnown RBP13.05□□□□□ -0.32
LINC00339-209ENST00000635450 GRPP07492 148 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 PPIAL4FP0DN26 164 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 ATP6V1B1P15313 513 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 EPHA1P21709 976 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 ACTC1P68032 377 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 ACTA1P68133 377 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 ZMYND11Q15326 602 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 LRRC36Q1X8D7 754 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 BCL2L15Q5TBC7 163 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 PLEKHG7Q6ZR37 379 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 SSX6Q7RTT6 188 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 THAP5Q7Z6K1 395 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 ENTHD1Q8IYW4 607 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 PIGCQ92535 297 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 LYZL4Q96KX0 146 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 RNF7Q9UBF6 113 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 MRM2Q9UI43 246 aaKnown RBP13.05□□□□□ -0.32
LINC00339-209ENST00000635450 OR52A1Q9UKL2 312 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 RHBDD3Q9Y3P4 386 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 PPIAL4AQ9Y536 164 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 PCDHGB1Q9Y5G3 927 aa13.05□□□□□ -0.32
LINC00339-209ENST00000635450 A0A0G2JMP0 313 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 A0A0X1KG70 313 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 hCG_1807616A0A1W2PRN6 198 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 METTL15A6NJ78 407 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 SLC16A6O15403 523 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 SULT1C4O75897 302 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 PTBP3O95758 552 aaKnown RBP13.04□□□□□ -0.32
LINC00339-209ENST00000635450 PMELP40967 661 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 IL5RAQ01344 420 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 MFGE8Q08431 387 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-209ENST00000635450 MPPED2Q15777 294 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 DCAF12L2Q5VW00 463 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 C1QL2Q7Z5L3 287 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 PACRGLQ8N7B6 248 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 OR4M2Q8NGB6 313 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 OR51E1Q8TCB6 317 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 MRPL48Q96GC5 212 aaKnown RBP13.04□□□□□ -0.32
LINC00339-209ENST00000635450 FAM71F1Q96KD3 344 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-209ENST00000635450 HIST1H2AAQ96QV6 131 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 MYCBPQ99417 103 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-209ENST00000635450 SLC6A7Q99884 636 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 RTL8AQ9BWD3 113 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 PATZ1Q9HBE1 687 aaKnown RBP13.04□□□□□ -0.32
LINC00339-209ENST00000635450 GPR84Q9NQS5 396 aa13.04□□□□□ -0.32
LINC00339-209ENST00000635450 ZNF816-ZNF321PA0A0X1KG74 233 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 DAPL1A0PJW8 107 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms