RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GLI4P10075 376 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 ANXA3P12429 323 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 CCL2P13500 99 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 FAM27E3Q08E93 113 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 PABPC1L2AQ5JQF8 200 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 ANKRD16Q6P6B7 361 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 MOB1AQ9H8S9 216 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 MRM2Q9UI43 246 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 ZNF462Q96JM2 2506 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 DISC1C4P0D8 188 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 GSTZ1O43708 216 aaPredicted RBP10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 CYB5AP00167 134 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 KLF9Q13886 244 aaPredicted RBP10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 P2RY6Q15077 328 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 PPA1Q15181 289 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 SLC22A24Q8N4F4 322 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 ASCC1Q8N9N2 400 aaKnown RBP10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 Q8NA96 180 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 BHLHE23Q8NDY6 225 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 ZFAND1Q8TCF1 268 aa10.92□□□□□ -0.66
SYNGAP1-207ENST00000628646 PRSS44E7EML9 344 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 CTDSPLO15194 276 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 C1QBP02746 253 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 GTF2F2P13984 249 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 RAB3AP20336 220 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 ZNF774Q6NX45 483 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 OR6M1Q8NGM8 313 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 OR8S1Q8NH09 359 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 SCGB3A2Q96PL1 93 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 TMEM246Q9BRR3 403 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 PHF3Q92576 2039 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 GABARAPH6UMI1 98 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 WISP2O76076 250 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 PLATP00750 562 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 NAT1P18440 290 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 ADRA2CP18825 462 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 FABP6P51161 128 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 CDC20BQ86Y33 519 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 OR56B4Q8NH76 319 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 ABHD6Q9BV23 337 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 PIGMQ9H3S5 423 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 LIN7BQ9HAP6 207 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 NKX2-6A6NCS4 301 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 M0R135 149 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 NUP62P37198 522 aaPredicted RBP10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 TMEM255AQ5JRV8 349 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 TMEM108Q6UXF1 575 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 ZNF799Q96GE5 643 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 SORCS2Q96PQ0 1159 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 HEATR1Q9H583 2144 aaKnown RBP10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 FRRS1LQ9P0K9 344 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 R4GMQ9 66 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 DMXL1Q9Y485 3027 aa10.91□□□□□ -0.66
SYNGAP1-207ENST00000628646 hCG_1807616A0A1W2PRN6 198 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 SMLR1H3BR10 107 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 TIMM8AO60220 97 aaPredicted RBP10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 OR3A2P47893 321 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 ECH1Q13011 328 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 DYRK1AQ13627 763 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 METTL11BQ5VVY1 283 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 STAC2Q6ZMT1 411 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 DNM1P46Q6ZS02 220 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 TMEM17Q86X19 198 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 GALNT11Q8NCW6 608 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 LILRB4Q8NHJ6 448 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 NPRL2Q8WTW4 380 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 C4orf45Q96LM5 186 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 NUDT15Q9NV35 164 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 AKAP13Q12802 2813 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 TPPPO94811 219 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 PGA4P0DJD7 388 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 PGA3P0DJD8 388 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 GDNFP39905 211 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 CA7P43166 264 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 SPATA46Q5T0L3 261 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 BOLLQ8N9W6 283 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 GAL3ST1Q99999 423 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 TMEM38BQ9NVV0 291 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 PLEKHA6Q9Y2H5 1048 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 ANKHD1Q8IWZ3 2542 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 TRBV5-5A0A0J9YX44 114 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 KDM4BO94953 1096 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 UQCRFS1P47985 274 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 GRB2P62993 217 aaKnown RBP10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 ARFRP1Q13795 201 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 ELFN2Q5R3F8 820 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 ZNF584Q8IVC4 421 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 CMTM4Q8IZR5 234 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 RNF122Q9H9V4 155 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 OBP2BQ9NPH6 170 aa10.9□□□□□ -0.66
SYNGAP1-207ENST00000628646 ITGA5P08648 1049 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 HTR2CP28335 458 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 CX3CR1P49238 355 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 ASPHD2Q6ICH7 369 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 LRRTM1Q86UE6 522 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 SIAH3Q8IW03 269 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
SYNGAP1-207ENST00000628646 GP6Q9HCN6 339 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms