RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 NPIPA5E9PKD4 350 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 F8VVB4 439 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 F8VWA3 439 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 TSPAN2O60636 221 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 BPNT1O95861 308 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 VSIG8P0DPA2 414 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 HLA-DOBP13765 273 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 GNB3P16520 340 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 ACKR3P25106 362 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CX3CR1P49238 355 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 MMP16P51512 607 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 NAAAQ02083 359 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 FMODQ06828 376 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 UNC119Q13432 240 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 MST1LQ2TV78 715 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 OR52N4Q8NGI2 321 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 ST7LQ8TDW4 575 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 ISOC2Q96AB3 205 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 TGM7Q96PF1 710 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CDC6Q99741 560 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 SULT4A1Q9BR01 284 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CHRDQ9H2X0 955 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CLEC1BQ9P126 229 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 SHPKQ9UHJ6 478 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 NPIPA1Q9UND3 350 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 RHBDD3Q9Y3P4 386 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 KCNAB3O43448 404 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 SYT7O43581 403 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 IFNA17P01571 189 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 PMP2P02689 132 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 KLHL24Q6TFL4 600 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 C9orf40Q8IXQ3 194 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 MARCH1Q8TCQ1 289 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 DAZLQ92904 295 aaKnown RBP7.73□□□□□ -1.17
VCL-207ENST00000624354 TAAR9Q96RI9 348 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 LRRC61Q9BV99 259 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 NMES1Q9C002 83 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CUTCQ9NTM9 273 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 COPS7AQ9UBW8 275 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 LPAR3Q9UBY5 353 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 PIAS3Q9Y6X2 628 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 SEC16AO15027 2179 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 FAM186AA6NE01 2351 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 IGHV5-51A0A0C4DH38 117 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 FAM157CP0CG43 387 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CD80P33681 288 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 GSK3AP49840 483 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 GFERP55789 205 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 TDGQ13569 410 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CLINT1Q14677 625 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.73□□□□□ -1.17
VCL-207ENST00000624354 KIAA0895LQ68EN5 471 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 AWAT2Q6E213 333 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 DRAM2Q6UX65 266 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 OR5D14Q8NGL3 314 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 OR4K15Q8NH41 348 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 GPR119Q8TDV5 335 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 PIGQQ9BRB3 760 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 TGIF2Q9GZN2 237 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 SLC5A6Q9Y289 635 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 ASXL3Q9C0F0 2248 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 ZFHX2Q9C0A1 2572 aaPredicted RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 IGKV3D-11A0A0A0MRZ8 115 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 LOC101059948A0A1B0GTJ6 334 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 BTBD17A6NE02 478 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 CXorf65A6NEN9 183 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 MFNGO00587 321 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 AGPAT2O15120 278 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 YIF1AO95070 293 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 NME2P22392 152 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ADH6P28332 368 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 LTBRP36941 435 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 FASLGP48023 281 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 DAP3P51398 398 aaKnown RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 CASP6P55212 293 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 RAB4BP61018 213 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 RNF4P78317 190 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 HGFACQ04756 655 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 PCK2Q16822 640 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 PNLIPRP3Q17RR3 467 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TMEM128Q5BJH2 165 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 HOGA1Q86XE5 327 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ZNF101Q8IZC7 436 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 OR13C9Q8NGT0 318 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TERB2Q8NHR7 220 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 RNF133Q8WVZ7 376 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 KLHDC7BQ96G42 594 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 MARS2Q96GW9 593 aaKnown RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 AKR1E2Q96JD6 320 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 WWTR1Q9GZV5 400 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 PTGES2Q9H7Z7 377 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TUBA4BQ9H853 241 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 CACFD1Q9UGQ2 172 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 KPTNQ9Y664 436 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TRBV6-7A0A0A0MS04 114 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TLCD2A6NGC4 264 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 M0R036 132 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TCAPO15273 167 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 IFNA2P01563 188 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms