RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 COL5A1-AS1Q5SY13 56 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 WDR73Q6P4I2 378 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 SLC25A42Q86VD7 318 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 LILRA3Q8N6C8 439 aaPredicted RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 FAM122AQ96E09 287 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 RIMS4Q9H426 269 aaPredicted RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 FBXO34Q9NWN3 711 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 B3GAT1Q9P2W7 334 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 TRBV11-1A0A0K0K1C0 115 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 CCL5P13501 91 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 UBE2G2P60604 165 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 OTOSQ8NHW6 89 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 ISOC2Q96AB3 205 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 PIK3IP1Q96FE7 263 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 OR10C1Q96KK4 312 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 MED16Q9Y2X0 877 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 SLCO1B1Q9Y6L6 691 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 GLI3P10071 1580 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 IRS1P35568 1242 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 P2RY1P47900 373 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 B2MP61769 119 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 FAM74A3Q4VXF1 159 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 OR51H1Q8NH63 302 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 LIPHQ8WWY8 451 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 ORAI1Q96D31 301 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 CER1O95813 267 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 KLKB1P03952 638 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 HOXD4P09016 255 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 PVRP15151 417 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 SULT1A2P50226 295 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 Q6ZN92 141 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 TMEM202A6NGA9 273 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 C4orf47A7E2U8 309 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 TCN2P20062 427 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 ERV3-1Q14264 604 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 CLEC12BQ2HXU8 276 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 TMEM176BQ3YBM2 270 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 SLC25A43Q8WUT9 341 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 SOCS7O14512 581 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 HSPB6O14558 160 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 GCGP01275 180 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 HLA-DQB1P01920 261 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 SURF2Q15527 256 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 CA5BP1Q8WTZ4 195 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 RAB24Q969Q5 203 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 ADIPOR1Q96A54 375 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 RAB40CQ96S21 281 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 ANGPTL4Q9BY76 406 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 LRP5O75197 1615 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 DLK1P80370 383 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 PLGLAQ15195 96 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 PWWP2BQ6NUJ5 590 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 Q6ZSR6 202 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 MARCH3Q86UD3 253 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 OR2T10Q8NGZ9 312 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 C1QTNF6Q9BXI9 259 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 SLC46A2Q9BY10 475 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 SIRT3Q9NTG7 399 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 KNL1Q8NG31 2342 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 RGPD4Q7Z3J3 1758 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 TRBV5-3A0A0A0MS03 114 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 POU3F2P20265 443 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 PXNP49023 591 aaPredicted RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 BCORP1Q8N888 145 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 OR52N4Q8NGI2 321 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 FAM3CQ92520 227 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 DUSP23Q9BVJ7 150 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 GPR84Q9NQS5 396 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 A0A1W2PPE2 198 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 DEGS1O15121 323 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 SLC25A6P12236 298 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 PMCHP20382 165 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 THBS4P35443 961 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 TMEM33P57088 247 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 CARD18P57730 90 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 MAT1AQ00266 395 aaKnown RBP8.04□□□□□ -1.12
VCL-206ENST00000623461 RUNX2Q13950 521 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 OR51F2Q8NH61 342 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 B9D1Q9UPM9 204 aa8.04□□□□□ -1.12
VCL-206ENST00000623461 A0A0A6YYD5 115 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 TERTO14746 1132 aaKnown RBP8.03□□□□□ -1.12
VCL-206ENST00000623461 HIST1H1DP16402 221 aaKnown RBP8.03□□□□□ -1.12
VCL-206ENST00000623461 YPEL5P62699 121 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 NHLH2Q02577 135 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 TGFBR3Q03167 851 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 AAED1Q7RTV5 226 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 FAM174AQ8TBP5 190 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 NRIP2Q9BQI9 281 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 CXCL16Q9H2A7 254 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 IL17BQ9UHF5 180 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 MYADML2A6NDP7 307 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 AQP7O14520 342 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 SPINT2O43291 252 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 EIF3GO75821 320 aaKnown RBP eCLIP8.03□□□□□ -1.12
VCL-206ENST00000623461 GPANK1O95872 356 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 HPP00738 406 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 DPTQ07507 201 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 NHLRC3Q5JS37 347 aa8.03□□□□□ -1.12
VCL-206ENST00000623461 TMEFF1Q8IYR6 380 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms