RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 UNC119Q13432 240 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 ZNF169Q14929 603 aaPredicted RBP14.25□□□□□ -0.13
LDB3-208ENST00000623007 GSG1Q2KHT4 349 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 EIF2S3LQ2VIR3 472 aaKnown RBP14.25□□□□□ -0.13
LDB3-208ENST00000623007 RNFT1Q5M7Z0 435 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 STEAP1BQ6NZ63 245 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 ZNF782Q6ZMW2 699 aaPredicted RBP14.25□□□□□ -0.13
LDB3-208ENST00000623007 NAA40Q86UY6 237 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 PAQR4Q8N4S7 273 aaPredicted RBP14.25□□□□□ -0.13
LDB3-208ENST00000623007 ZBTB8BQ8NAP8 495 aaPredicted RBP14.25□□□□□ -0.13
LDB3-208ENST00000623007 MRPS24Q96EL2 167 aaKnown RBP14.25□□□□□ -0.13
LDB3-208ENST00000623007 GHITMQ9H3K2 345 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 PLSCR2Q9NRY7 297 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 CLCF1Q9UBD9 225 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 KCNN3Q9UGI6 736 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 SCP2D1Q9UJQ7 156 aa14.25□□□□□ -0.13
LDB3-208ENST00000623007 IGKV1-9A0A0C4DH69 117 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 ZNF816-ZNF321PA0A0X1KG74 233 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 hCG_38984A0A1B0GV85 526 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 SNRPGP15A8MWD9 76 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 CA11O75493 328 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 FAHP16930 419 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 CPT2P23786 658 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 CCR6P51684 374 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 FUT6P51993 359 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 NHLH1Q02575 133 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 PLA2G7Q13093 441 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 MRPL49Q13405 166 aaKnown RBP14.24□□□□□ -0.13
LDB3-208ENST00000623007 ACTBL2Q562R1 376 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 RPUSD3Q6P087 351 aaKnown RBP14.24□□□□□ -0.13
LDB3-208ENST00000623007 Q6ZTK2 550 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 LIX1LQ8IVB5 337 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 CSNK2A3Q8NEV1 391 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 OR5L1Q8NGL2 311 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 SNIP1Q8TAD8 396 aaKnown RBP14.24□□□□□ -0.13
LDB3-208ENST00000623007 WNT2BQ93097 391 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 OR51J1Q9H342 316 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 NOX3Q9HBY0 568 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 PAIP2BQ9ULR5 123 aaKnown RBP14.24□□□□□ -0.13
LDB3-208ENST00000623007 PLEKHA6Q9Y2H5 1048 aa14.24□□□□□ -0.13
LDB3-208ENST00000623007 A0A0A6YYJ9 748 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 ZNF736B4DX44 427 aaPredicted RBP14.23□□□□□ -0.13
LDB3-208ENST00000623007 DISC1C4P0D8 188 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 ICMTO60725 284 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 CD74P04233 296 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 MPZP25189 248 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 ERP29P30040 261 aaKnown RBP14.23□□□□□ -0.13
LDB3-208ENST00000623007 RBP2P50120 134 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 GLCCI1Q86VQ1 547 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 GABRG1Q8N1C3 465 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 FAM89BQ8N5H3 189 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 CHST4Q8NCG5 386 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 OR1K1Q8NGR3 316 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 CCDC107Q8WV48 283 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 PIGTQ969N2 578 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 BOD1Q96IK1 185 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 PRRT1Q99946 306 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 TM2D1Q9BX74 207 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 LPAR5Q9H1C0 372 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 ITGB1BP2Q9UKP3 347 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 H3BUI4 141 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 GMDSO60547 372 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 NRASP01111 189 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 WT1P19544 449 aaPredicted RBP14.23□□□□□ -0.13
LDB3-208ENST00000623007 PTGER4P35408 488 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 APLNRP35414 380 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 ATP1B3P54709 279 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 GNG2P59768 71 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 RAB1AP62820 205 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 CD300CQ08708 224 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 UBE2V2Q15819 145 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 CDNFQ49AH0 187 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 SFRP5Q5T4F7 317 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 SFRP4Q6FHJ7 346 aaPredicted RBP14.23□□□□□ -0.13
LDB3-208ENST00000623007 MTFR2Q6P444 385 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 FAM214BQ7L5A3 538 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 ACBD4Q8NC06 268 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 OR4C16Q8NGL9 310 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 TNFAIP8L1Q8WVP5 186 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 GIMAP1Q8WWP7 306 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 RAB3CQ96E17 227 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 BORCS8Q96FH0 119 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 C1orf147Q96MC9 270 aaPredicted RBP14.23□□□□□ -0.13
LDB3-208ENST00000623007 ALX4Q9H161 411 aaPredicted RBP14.23□□□□□ -0.13
LDB3-208ENST00000623007 METTL9Q9H1A3 318 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 IFT46Q9NQC8 304 aa14.23□□□□□ -0.13
LDB3-208ENST00000623007 SERPINE3A8MV23 424 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 PRSS44E7EML9 344 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 E9PLN8 166 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 CRTAPO75718 401 aaPredicted RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 RAB3DO95716 219 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 MPIG6BO95866 241 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 IGHV3-9P01782 118 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 CRYABP02511 175 aaKnown RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 OR3A4PP47883 348 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 MTCP1P56278 107 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 RPS27AP62979 156 aaKnown RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 FAM3AP98173 230 aa14.22□□□□□ -0.13
LDB3-208ENST00000623007 NUFIP2Q7Z417 695 aaKnown RBP14.22□□□□□ -0.13
LDB3-208ENST00000623007 BIVMQ86UB2 503 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms