RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ELF5Q9UKW6 265 aaPredicted RBP7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 MAB21L2Q9Y586 359 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 C2CD3Q4AC94 2353 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 SZT2Q5T011 3432 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 C3orf80F5H4A9 247 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 PET100P0DJ07 73 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 APOBEC1P41238 236 aaKnown RBP7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 NANOS3P60323 173 aaKnown RBP7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 RAB1AP62820 205 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 ALKBH1Q13686 389 aaKnown RBP7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 CDONQ4KMG0 1287 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 AKR1C8PQ5T2L2 129 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 GTPBP8Q8N3Z3 284 aaPredicted RBP7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 ZNF321PQ8N8H1 164 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 ANGPTL6Q8NI99 470 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 FAM3DQ96BQ1 224 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 SORCS2Q96PQ0 1159 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 PRMT8Q9NR22 394 aaPredicted RBP7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 RABL2BQ9UNT1 228 aa7.4□□□□□ -1.22
PTPDC1-204ENST00000620992 PRR19A6NJB7 356 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 CCSO14618 274 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 DEGS1O15121 323 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 PIN1P1O15428 100 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 EIF4E2O60573 245 aaKnown RBP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 CLDN1O95832 211 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 CFDP00746 253 aaPredicted RBP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 CLEC3BP05452 202 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 SERPINA7P05543 415 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 SULT1A3P0DMM9 295 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 SULT1A4P0DMN0 295 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 CDK2P24941 298 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 PTGS2P35354 604 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 EIF2S3P41091 472 aaKnown RBP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 HAAOP46952 286 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 RPS11P62280 158 aaKnown RBP eCLIP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 MGAT2Q10469 447 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 BAMBIQ13145 260 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 DYRK1AQ13627 763 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 SNTB1Q13884 538 aaKnown RBP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 ETFDHQ16134 617 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 OR8G2PQ6IF36 304 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 SLC38A6Q8IZM9 456 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 OR1J1Q8NGS3 322 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 FLVCR1-AS1Q8TAF5 88 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 NUDCD2Q8WVJ2 157 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 TRAF4Q9BUZ4 470 aaPredicted RBP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 TPPP3Q9BW30 176 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 HEYLQ9NQ87 328 aaPredicted RBP7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 ASF1BQ9NVP2 202 aa7.4□□□□□ -1.23
PTPDC1-204ENST00000620992 LILRA5A6NI73 299 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 AIPO00170 330 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 HSD17B6O14756 317 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 RER1O15258 196 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 CBR3O75828 277 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 CELA2AP08217 269 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 RAB6AP20340 208 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 GPR3P46089 330 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 LUMP51884 338 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 TAGLNQ01995 201 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 TOMM34Q15785 309 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 SMUG1Q53HV7 270 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 METTL11BQ5VVY1 283 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 OR2T2Q6IF00 324 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 NAXDQ8IW45 347 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 CCDC71LQ8N9Z2 235 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 HSD17B11Q8NBQ5 300 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 NPEPL1Q8NDH3 523 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 SLC25A43Q8WUT9 341 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 ASB17Q8WXJ9 295 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 FRZBQ92765 325 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 PINX1Q96BK5 328 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 GABRG3Q99928 467 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 ZNF286AQ9HBT8 521 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 MYOTQ9UBF9 498 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 PCDHGA9Q9Y5G4 932 aaKnown RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 PHF1O43189 567 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 DHHO43323 396 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 GPRIN2O60269 458 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 MPC2O95563 127 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 AKAIN1P0CW23 69 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 ZP1P60852 638 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 PMP22Q01453 160 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 LINC00303Q3SY05 128 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 PDLIM3Q53GG5 364 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 ATP1A1-AS1Q5TC04 95 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 SEMA6DQ8NFY4 1073 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 MVB12AQ96EY5 273 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 OCSTAMPQ9BR26 566 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 EGLN1Q9GZT9 426 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 PCED1AQ9H1Q7 454 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 STEAP1Q9UHE8 339 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 USP9XQ93008 2570 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 GABARAPH6UMI1 98 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 NKX2-8O15522 239 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 TNFSF14O43557 240 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 RGS11O94810 467 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 GLCEO94923 617 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 AGFG2O95081 481 aa7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 TMIGD3P0DMS9 266 aaPredicted RBP7.39□□□□□ -1.23
PTPDC1-204ENST00000620992 ADH6P28332 368 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms