RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TAS2R30P59541 319 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 OXA1LQ15070 435 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 OR10K2Q6IF99 312 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 GFRALQ6UXV0 394 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 TMEM200AQ86VY9 491 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 APOBEC4Q8WW27 367 aaKnown RBP12.37□□□□□ -0.43
CIITA-213ENST00000618327 KISS1RQ969F8 398 aaPredicted RBP12.37□□□□□ -0.43
CIITA-213ENST00000618327 UQCC2Q9BRT2 126 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SERTAD4Q9NUC0 356 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 SHPKQ9UHJ6 478 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 FOXJ3Q9UPW0 622 aa12.37□□□□□ -0.43
CIITA-213ENST00000618327 GPR137BO60478 399 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 PMS2P2O95744 297 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 DDOSTP39656 456 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 SLC9A3R2Q15599 337 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 DRAM2Q6UX65 266 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 LHFPL2Q6ZUX7 228 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 KANSL1Q7Z3B3 1105 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 MRM2Q9UI43 246 aaKnown RBP12.36□□□□□ -0.43
CIITA-213ENST00000618327 MRPS18BQ9Y676 258 aaKnown RBP12.36□□□□□ -0.43
CIITA-213ENST00000618327 ZNF32P17041 273 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 CD96P40200 585 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 RPS23P62266 143 aaKnown RBP12.36□□□□□ -0.43
CIITA-213ENST00000618327 ANKRD16Q6P6B7 361 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 ZNF808Q8N4W9 903 aaPredicted RBP12.36□□□□□ -0.43
CIITA-213ENST00000618327 SDSLQ96GA7 329 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 SCPEP1Q9HB40 452 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 SLC17A2O00624 439 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 EDN3P14138 238 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 ASAH1Q13510 395 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 OR8G1Q15617 311 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 BATF2Q8N1L9 274 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 PXT1Q8NFP0 134 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 OR6S1Q8NH40 331 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 RNF141Q8WVD5 230 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 EMG1Q92979 244 aaKnown RBP12.36□□□□□ -0.43
CIITA-213ENST00000618327 NOTCH4Q99466 2003 aa12.36□□□□□ -0.43
CIITA-213ENST00000618327 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 TMEM235A6NFC5 223 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 TGFBR3LH3BV60 316 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 TRAPPC2P0DI81 140 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 TRAPPC2BP0DI82 140 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 IRF3Q14653 427 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 GSG1Q2KHT4 349 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 DMRTC1Q5HYR2 192 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 PXDC1Q5TGL8 231 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 PP6455Q8WZ26 134 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 APOBEC3DQ96AK3 386 aaPredicted RBP12.35□□□□□ -0.43
CIITA-213ENST00000618327 ADAM19Q9H013 955 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 RYDENQ9NUL5 291 aaKnown RBP12.35□□□□□ -0.43
CIITA-213ENST00000618327 SHOXO15266 292 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 AQP8O94778 261 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 COX6A1P12074 109 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 CBR1P16152 277 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 RAB4AP20338 218 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
CIITA-213ENST00000618327 PCOLCEQ15113 449 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ZNF528Q3MIS6 628 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
CIITA-213ENST00000618327 SLC30A7Q8NEW0 376 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ABHD5Q8WTS1 349 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
CIITA-213ENST00000618327 UCN2Q96RP3 112 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 IGKV3D-11A0A0A0MRZ8 115 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 HLA-DOBP13765 273 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ZNF17P17021 662 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 CRYBA2P53672 197 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 HMGN3Q15651 99 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ZNF774Q6NX45 483 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 CDC20BQ86Y33 519 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 BORCS7Q96B45 105 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ANGPTL4Q9BY76 406 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 NIT2Q9NQR4 276 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 MDFIC2A0A1B0GVS7 189 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ACTL6AO96019 429 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 SERPINF1P36955 418 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 PLA2G7Q13093 441 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 CCDC190Q86UF4 302 aa12.35□□□□□ -0.43
CIITA-213ENST00000618327 ALPK2Q86TB3 2170 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SMLR1H3BR10 107 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 PMP2P02689 132 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SP1P08047 785 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 ATF1P18846 271 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 THBS4P35443 961 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 INPP5JQ15735 1006 aaPredicted RBP12.34□□□□□ -0.43
CIITA-213ENST00000618327 CSRP2Q16527 193 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 PLXDC2Q6UX71 529 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SLC38A9Q8NBW4 561 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 RBMXL1Q96E39 390 aaKnown RBP12.34□□□□□ -0.43
CIITA-213ENST00000618327 MRPS18AQ9NVS2 196 aaKnown RBP12.34□□□□□ -0.43
CIITA-213ENST00000618327 ZNF816-ZNF321PA0A0X1KG74 233 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 OR10R2Q8NGX6 335 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 SLC25A21Q9BQT8 299 aaPredicted RBP12.34□□□□□ -0.43
CIITA-213ENST00000618327 SMCO4Q9NRQ5 59 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 RP1P56715 2156 aa12.34□□□□□ -0.43
CIITA-213ENST00000618327 PPP1R2P9O14990 202 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms