RNA–Protein interactions for RNA: ENST00000615041.1

FAM49B-229, Transcript of family with sequence similarity 49 member B, human

TSL 5 BASIC

Gene FAM49B, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-229	ENST00000615041	MMAA	Q8IVH4	418 aa	Known RBP	4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	TMEM183A	Q8IXX5	376 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	STK40	Q8N2I9	435 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	LIX1	Q8N485	282 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	PQLC3	Q8N755	202 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	OR7G2	Q8NG99	324 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	ASB9	Q96DX5	294 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	CAPZA3	Q96KX2	299 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	SH3GL3	Q99963	347 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	PRSS16	Q9NQE7	514 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	FBXL12	Q9NXK8	326 aa		4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	RPL26L1	Q9UNX3	145 aa	Known RBP	4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	UTP11	Q9Y3A2	253 aa	Known RBP	4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.28	□□□□□ -1.72
FAM49B-229	ENST00000615041	ANKRD36	A6QL64	1941 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	MYO18A	Q92614	2054 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ATG2B	Q96BY7	2078 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041		A0A0B4J2A0	478 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	OR2AG2	A6NM03	316 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041		C9JVG2	144 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041		F6UB75	175 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	KCNK1	O00180	336 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	RAB29	O14966	203 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	LSM1	O15116	133 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	PFDN6	O15212	129 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	EED	O75530	441 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	CLIC3	O95833	236 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	TSPAN13	O95857	204 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	AGT	P01019	485 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ANXA5	P08758	320 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	HLA-E	P13747	358 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ZNF30	P17039	623 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	DEK	P35659	375 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	SSR4	P51571	173 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	NCBP2	P52298	156 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ACTA2	P62736	377 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ACTG2	P63267	376 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ACTC1	P68032	377 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ACTA1	P68133	377 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	BASP1	P80723	227 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	C9orf64	Q5T6V5	341 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	TMEM215	Q68D42	235 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	C8orf74	Q6P047	294 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041		Q6ZS52	159 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	NPW	Q8N729	165 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	TMEM105	Q8N8V8	129 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	DNAAF3	Q8N9W5	541 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	C1orf54	Q8WWF1	131 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	IL22RA2	Q969J5	263 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	ZNF578	Q96N58	590 aa	Predicted RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	OLFM3	Q96PB7	478 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	TRABD	Q9H4I3	376 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	FGF20	Q9NP95	211 aa	Predicted RBP	4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	SHPK	Q9UHJ6	478 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041	WSB1	Q9Y6I7	421 aa		4.27	□□□□□ -1.73
FAM49B-229	ENST00000615041		K7ERQ8	282 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	PSMD11	O00231	422 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	DFNA5	O60443	496 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	SS18L1	O75177	396 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	OR2J3	O76001	311 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	IGLV2-23	P01705	113 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	KRT14	P02533	472 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	FTH1	P02794	183 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	BGLAP	P02818	100 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	HLA-DQB2	P05538	268 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	SMIM10L1	P0DMW3	83 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	ADRB3	P13945	408 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	FOLR1	P15328	257 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	GABRG2	P18507	467 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	AK4	P27144	223 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	COIL	P38432	576 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	NAA10	P41227	235 aa	Predicted RBP	4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	P2RY2	P41231	377 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	CXCL5	P42830	114 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	RFX3	P48380	749 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	TMED10	P49755	219 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	MAX	P61244	160 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	DR1	Q01658	176 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	CAV1	Q03135	178 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	CDH17	Q12864	832 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	ANKRD26P1	Q6NSI1	321 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	ZNF567	Q8N184	647 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	MREG	Q8N565	214 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	OR52K2	Q8NGK3	314 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	OR6K2	Q8NGY2	324 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	ACMSD	Q8TDX5	336 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	SLC38A4	Q969I6	547 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	PIK3IP1	Q96FE7	263 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	IMP4	Q96G21	291 aa	Known RBP	4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	SMIM10	Q96HG1	83 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	TSNARE1	Q96NA8	513 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	P2RX4	Q99571	388 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	SLC29A1	Q99808	456 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	TBL1Y	Q9BQ87	522 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	RACGAP1	Q9H0H5	632 aa		4.26	□□□□□ -1.73
FAM49B-229	ENST00000615041	RPF2	Q9H7B2	306 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms