RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 A6NLC8 198 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 C22orf46C9J442 243 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 CLDN25C9JDP6 229 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 SFTPBP07988 381 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 CD55P08174 381 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 FAM209AQ5JX71 171 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 COMMD2Q86X83 199 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 FAM216BQ8N7L0 139 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 OR13G1Q8NGZ3 307 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 TRMT10AQ8TBZ6 339 aaKnown RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 SPSB4Q96A44 273 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 GPR173Q9NS66 373 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 OPN4Q9UHM6 478 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 ZDHHC8Q9ULC8 765 aa4.76□□□□□ -1.65
CPNE3-208ENST00000614678 SIRT4Q9Y6E7 314 aaPredicted RBP4.76□□□□□ -1.65
CPNE3-208ENST00000614678 hCG_1807616A0A1W2PRN6 198 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 J3QRE1 110 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 NDUFS8O00217 210 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 SYNGR1O43759 233 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 LALBAP00709 142 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 MSMBP08118 114 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PRDX4Q13162 271 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 KLF17Q5JT82 389 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-208ENST00000614678 WDR38Q5JTN6 314 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 OR2G6Q5TZ20 316 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 FAM166AQ6J272 317 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF841Q6ZN19 808 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 CALHM1Q8IU99 346 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ZFP41Q8N8Y5 198 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 OR13C5Q8NGS8 318 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 TMEM186Q96B77 213 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 LGALS12Q96DT0 336 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 RNFT2Q96EX2 444 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 BEX2Q9BXY8 128 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 NKIRAS2Q9NYR9 191 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF581Q9P0T4 197 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PNMA8CA0A1B0GUJ8 204 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 LOC100130705A0A1B0GUX0 176 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 XPNPEP2O43895 674 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 TMCC2O75069 709 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ERCC1P07992 297 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ADH4P08319 380 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 IGHV4-38-2P0DP08 117 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 CHN2P52757 468 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 DSCR9P59020 149 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PSMA6P60900 246 aaKnown RBP4.75□□□□□ -1.65
CPNE3-208ENST00000614678 WDR82Q6UXN9 313 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF679Q8IYX0 411 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 LINC01356Q8N9X3 169 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 CCL13Q99616 98 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 GNG8Q9UK08 70 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 GMPPBQ9Y5P6 360 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 A0A1B0GWJ7 208 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PAX7P23759 505 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 HTR1FP30939 366 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 SLC15A1P46059 708 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ZNF91Q05481 1191 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 MALLQ13021 153 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 INSL4Q14641 139 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 KRTAP24-1Q3LI83 254 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 CHRFAM7AQ494W8 412 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 C1QTNF12Q5T7M4 302 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 BRD3OSQ6XYD6 125 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 LRRC28Q86X40 367 aaPredicted RBP4.75□□□□□ -1.65
CPNE3-208ENST00000614678 YIPF7Q8N8F6 280 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 OR1M1Q8NGA1 313 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 OR5L1Q8NGL2 311 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 CYGBQ8WWM9 190 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 RFT1Q96AA3 541 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PDCD1LG2Q9BQ51 273 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 MROQ9BYG7 248 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ESM1Q9NQ30 184 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 FRRS1LQ9P0K9 344 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 ATPIF1Q9UII2 106 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PIGLQ9Y2B2 252 aa4.75□□□□□ -1.65
CPNE3-208ENST00000614678 PTBP3O95758 552 aaKnown RBP4.74□□□□□ -1.65
CPNE3-208ENST00000614678 WNT2P09544 360 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 FCGR1AP12314 374 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 RGS6P49758 472 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 GRB2P62993 217 aaKnown RBP4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ECH1Q13011 328 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 IKZF1Q13422 519 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 PDCD1Q15116 288 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 OR8B8Q15620 311 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 UBE2V2Q15819 145 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 PCGF3Q3KNV8 242 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 METTL11BQ5VVY1 283 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ASPHD2Q6ICH7 369 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 CRIP3Q6Q6R5 217 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 THAP5Q7Z6K1 395 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 SCCPDHQ8NBX0 429 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 ADAT3Q96EY9 351 aaPredicted RBP4.74□□□□□ -1.65
CPNE3-208ENST00000614678 C4orf36Q96KX1 117 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 USE1Q9NZ43 259 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 A0A1W2PRD5 423 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 A0A1W2PRF3 423 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 A0A1W2PRM7 423 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 J3QLW9 94 aa4.74□□□□□ -1.65
CPNE3-208ENST00000614678 MT-ND5P03915 603 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms