RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 GMDSO60547 372 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 CALCRP30988 508 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 UCP2P55851 309 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 PLA2G7Q13093 441 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 PPA1Q15181 289 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 P2RY14Q15391 338 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 ZBTB37Q5TC79 503 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 LRRC28Q86X40 367 aaPredicted RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 JAGN1Q8N5M9 183 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 OR6M1Q8NGM8 313 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 ZNF671Q8TAW3 534 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 BORCS5Q969J3 196 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 FOXRED1Q96CU9 486 aaPredicted RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 SLC25A38Q96DW6 304 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 DIRAS2Q96HU8 199 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 SPACA5Q96QH8 159 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 SDHCQ99643 169 aaPredicted RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 MRI1Q9BV20 369 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 OPA3Q9H6K4 179 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 CNTD2Q9H8S5 307 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 MOV10Q9HCE1 1003 aaKnown RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 IGHV2OR16-5A0A0B4J2B6 119 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 ERCC1P07992 297 aaPredicted RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 HTR2CP28335 458 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 CD40LGP29965 261 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 PPP5CP53041 499 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 SCAND1P57086 179 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 RAB11BQ15907 218 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 FBXW12Q6X9E4 464 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 MRPL21Q7Z2W9 205 aaKnown RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 CDH26Q8IXH8 852 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 OR51D1Q8NGF3 324 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 OR5L1Q8NGL2 311 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 CMTM3Q96MX0 182 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 UQCC2Q9BRT2 126 aa12.28□□□□□ -0.44
USP39-220ENST00000613444 EIF3KQ9UBQ5 218 aaKnown RBP12.28□□□□□ -0.44
USP39-220ENST00000613444 ZNF816-ZNF321PA0A0X1KG74 233 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 APOA1P02647 267 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 ERVS71-1P61550 626 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 PPP1CBP62140 327 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 DCTN2Q13561 401 aaKnown RBP12.27□□□□□ -0.45
USP39-220ENST00000613444 CLVS2Q5SYC1 327 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 FJX1Q86VR8 437 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 ITFG2Q969R8 447 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 FAM3DQ96BQ1 224 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 MUCL1Q96DR8 90 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 USB1Q9BQ65 265 aaKnown RBP12.27□□□□□ -0.45
USP39-220ENST00000613444 OR10A4Q9H209 315 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 KCNK15Q9H427 330 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 GPR173Q9NS66 373 aa12.27□□□□□ -0.45
USP39-220ENST00000613444 LDLRAD4O15165 306 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 AZGP1P25311 298 aaKnown RBP12.26□□□□□ -0.45
USP39-220ENST00000613444 CHRNB4P30926 498 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 ZNF93P35789 620 aaPredicted RBP12.26□□□□□ -0.45
USP39-220ENST00000613444 POU3F4P49335 361 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 ZNF83P51522 516 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 IFITM3Q01628 133 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 NAAAQ02083 359 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 C2orf76Q3KRA6 126 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 TMEM255AQ5JRV8 349 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 SPATA46Q5T0L3 261 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 OR4M1Q8NGD0 313 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 CCDC120Q96HB5 630 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 SORCS2Q96PQ0 1159 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 OR2J1Q9GZK6 312 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 ETV7Q9Y603 341 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 FABP12A6NFH5 140 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 CD300LBA8K4G0 201 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 LILRA1O75019 489 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 NRASP01111 189 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 THBDP07204 575 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 RIN1Q13671 783 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 CDSNQ15517 529 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 FBXL19-AS1Q494R0 122 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 UBE2NLQ5JXB2 153 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 BIVMQ86UB2 503 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 SNX29P2Q8IUI4 249 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 CMTM4Q8IZR5 234 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 NPRL2Q8WTW4 380 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
USP39-220ENST00000613444 SRRQ9GZT4 340 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 ABCG5Q9H222 651 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 ADAM30Q9UKF2 790 aa12.26□□□□□ -0.45
USP39-220ENST00000613444 LOC100289279A0A1B0GTE1 492 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 CST4P01036 141 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 HCKP08631 526 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 ASCL1P50553 236 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 EFNB2P52799 333 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 QRFPP83859 136 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 MADCAM1Q13477 382 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 KISS1Q15726 138 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 METAP1DQ6UB28 335 aaPredicted RBP12.25□□□□□ -0.45
USP39-220ENST00000613444 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 LILRB4Q8NHJ6 448 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 SLC25A40Q8TBP6 338 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 PIGTQ969N2 578 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms