RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 CHST4Q8NCG5 386 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 OR51E1Q8TCB6 317 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 NUDCD2Q8WVJ2 157 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 C1QTNF6Q9BXI9 259 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 CST11Q9H112 138 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 IFT46Q9NQC8 304 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 FBXL2Q9UKC9 423 aa12.96□□□□□ -0.33
CDH1-213ENST00000612417 DMXL1Q9Y485 3027 aa12.96□□□□□ -0.34
CDH1-213ENST00000612417 NCOA6Q14686 2063 aaPredicted RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 C9orf170A2RU37 121 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 POM121CA8CG34 1229 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 SPDEFO95238 335 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 CSN2P05814 226 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 HOXD4P09016 255 aaPredicted RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 ADH6P28332 368 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 HRH1P35367 487 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 CD96P40200 585 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 GABREP78334 506 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 PPP1R1AQ13522 171 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 PGAP1Q75T13 922 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 ANGPTL5Q86XS5 388 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 OR5AS1Q8N127 324 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 FADS6Q8N9I5 356 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 BVESQ8NE79 360 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 ST8SIA2Q92186 375 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 C1orf147Q96MC9 270 aaPredicted RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 OXGR1Q96P68 337 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 POLR1DQ9Y2S0 133 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 KCNK7Q9Y2U2 307 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 MUC6Q6W4X9 2439 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 ZNF292O60281 2723 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 SSX5O60225 188 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 GSTP1P09211 210 aaKnown RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 CCL3P10147 92 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 GNB3P16520 340 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 OR52W1Q6IF63 320 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 JMJD6Q6NYC1 403 aaPredicted RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 IL22RA1Q8N6P7 574 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 OR8B12Q8NGG6 310 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 DMRTA2Q96SC8 542 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 PHB2Q99623 299 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
CDH1-213ENST00000612417 SHARPINQ9H0F6 387 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 LPAR5Q9H1C0 372 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 COMMD9Q9P000 198 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 HDGFL3Q9Y3E1 203 aa12.95□□□□□ -0.34
CDH1-213ENST00000612417 OR2AT4A6NND4 320 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 G3V3Y1 287 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 SERPINA7P05543 415 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 NBL1P41271 181 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 EIF1P41567 113 aaKnown RBP12.94□□□□□ -0.34
CDH1-213ENST00000612417 HAAOP46952 286 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
CDH1-213ENST00000612417 MFAP5Q13361 173 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 TUSC1Q2TAM9 212 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 WDSUB1Q8N9V3 476 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 JSRP1Q96MG2 331 aaPredicted RBP12.94□□□□□ -0.34
CDH1-213ENST00000612417 OR5B2Q96R09 309 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 SELENOIQ9C0D9 397 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 SEC61A2Q9H9S3 476 aa12.94□□□□□ -0.34
CDH1-213ENST00000612417 A0A1B0GW55 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 A0A1W2PNR3 127 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 AQP7P3A6NL99 342 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ZNF814B7Z6K7 855 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 BCL2L11O43521 198 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUS4LO95620 317 aaKnown RBP12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4L2P0CJ85 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4L3P0CJ86 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4L4P0CJ87 422 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4L5P0CJ88 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4L6P0CJ89 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4L7P0CJ90 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ZNF17P17021 662 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 IL13RA1P78552 427 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 CHAF1BQ13112 559 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 FAM189A2Q15884 450 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ZNF468Q5VIY5 522 aaPredicted RBP12.93□□□□□ -0.34
CDH1-213ENST00000612417 TMEM81Q6P7N7 255 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ABHD12BQ7Z5M8 362 aaPredicted RBP12.93□□□□□ -0.34
CDH1-213ENST00000612417 KCNG3Q8TAE7 436 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 PPP1R1CQ8WVI7 109 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 PHYHIPLQ96FC7 376 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 THOC3Q96J01 351 aaKnown RBP12.93□□□□□ -0.34
CDH1-213ENST00000612417 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DNTTIP1Q9H147 329 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 TMEM185BQ9H7F4 350 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 RASL12Q9NYN1 266 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DUX4Q9UBX2 424 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 MRPS28Q9Y2Q9 187 aaKnown RBP12.93□□□□□ -0.34
CDH1-213ENST00000612417 MED12Q93074 2177 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 A0A0A6YYD4 124 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 KANTRA0A1W2PQU2 76 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 RNF222A6NCQ9 220 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 DBX1A6NMT0 343 aa12.93□□□□□ -0.34
CDH1-213ENST00000612417 CEACAM18A8MTB9 384 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms