RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
TARDBP-213ENST00000611963 ABCA4P78363 2273 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CHD3Q12873 2000 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 hCG_38984A0A1B0GV85 526 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CLDN25C9JDP6 229 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 AIPO00170 330 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CCL21O00585 134 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 XRCC2O43543 280 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 MTRF1O75570 445 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CLDN1O95832 211 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 EIF4EP06730 217 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CECR9P0C854 216 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ZNF12P17014 697 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 PSMB1P20618 241 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CFL1P23528 166 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 BDKRB2P30411 391 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 THBS4P35443 961 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 GSK3AP49840 483 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ZNF83P51522 516 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 FAM3AP98173 230 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 HLXQ14774 488 aaPredicted RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ZNF846Q147U1 533 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 RAB11BQ15907 218 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 SPATA46Q5T0L3 261 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 DDI2Q5TDH0 399 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ZNF529Q6P280 563 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CNIH2Q6PI25 160 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 MRGPRGQ86SM5 289 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CCDC190Q86UF4 302 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CROCCP3Q8IVE0 287 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 SERPINA12Q8IW75 414 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ZNF101Q8IZC7 436 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 JAGN1Q8N5M9 183 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 SAMD12Q8N8I0 201 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 DTX3Q8N9I9 347 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 SEMA6DQ8NFY4 1073 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 OR56B2PQ8NGI1 322 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 OR52N4Q8NGI2 321 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 OR5D14Q8NGL3 314 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 NPRL2Q8WTW4 380 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 S100ZQ8WXG8 99 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ACOT12Q8WYK0 555 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 AKAP1Q92667 903 aaKnown RBP eCLIP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 RFT1Q96AA3 541 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 APOBEC3DQ96AK3 386 aaPredicted RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 WDFY2Q96P53 400 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 WDR12Q9GZL7 423 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ACTR6Q9GZN1 396 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 PLGRKTQ9HBL7 147 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 HMG20AQ9NP66 347 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 GPR173Q9NS66 373 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 CRIM1Q9NZV1 1036 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ZNF629Q9UEG4 869 aaPredicted RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 OR5V1Q9UGF6 321 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 AMDHD2Q9Y303 409 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 ANKHD1Q8IWZ3 2542 aaKnown RBP6.98□□□□□ -1.29
TARDBP-213ENST00000611963 HCFC1P51610 2035 aa6.98□□□□□ -1.29
TARDBP-213ENST00000611963 NBPF19A0A087WUL8 3843 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 IGHV1-18A0A0C4DH31 117 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 IGKV1-9A0A0C4DH69 117 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 LOC390937A0A1W2PQ73 354 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 MEGF11A6BM72 1044 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 FAM25AB3EWG3 89 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 FAM25CB3EWG5 89 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 FAM25GB3EWG6 89 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 SLC17A2O00624 439 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 SULT1B1O43704 296 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 SMPD2O60906 423 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 IGKV3-15P01624 115 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 IGLV1-44P01699 117 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 ELK1P19419 428 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 RAB3AP20336 220 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 AZGP1P25311 298 aaKnown RBP6.97□□□□□ -1.29
TARDBP-213ENST00000611963 COL8A1P27658 744 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 MAP2K3P46734 347 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 ERVS71-1P61550 626 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 RIPPLY1Q0D2K3 151 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 MALLQ13021 153 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 PLA2G7Q13093 441 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 GK2Q14410 553 aaPredicted RBP6.97□□□□□ -1.29
TARDBP-213ENST00000611963 OR8B8Q15620 311 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 TAB1Q15750 504 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 UBE2V2Q15819 145 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 SPANXN2Q5MJ10 180 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 TIMM23BQ5SRD1 257 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 GLT8D1Q68CQ7 371 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 LINC00299Q6ZSB3 139 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 MRPL21Q7Z2W9 205 aaKnown RBP6.97□□□□□ -1.29
TARDBP-213ENST00000611963 FJX1Q86VR8 437 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 SNX29P2Q8IUI4 249 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 CCDC54Q8NEL0 328 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 STEAP2Q8NFT2 490 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 ZFAND2BQ8WV99 257 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 PIGTQ969N2 578 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 SPSB4Q96A44 273 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 CCDC120Q96HB5 630 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 DIRAS2Q96HU8 199 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 RGCCQ9H4X1 137 aa6.97□□□□□ -1.29
TARDBP-213ENST00000611963 PPP1R3EQ9H7J1 279 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms