RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DTYMKP23919 212 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 AK4P27144 223 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 LOXP28300 417 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 HTR2CP28335 458 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 GABRR2P28476 465 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 NBL1P41271 181 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 TMEM33P57088 247 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 LSM6P62312 80 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 MRPS25P82663 173 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 C2orf54Q08AI8 447 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 PRPSAP1Q14558 356 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 OR4D1Q15615 310 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 RPEL1Q2QD12 228 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 TTLL9Q3SXZ7 439 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 CCDC153Q494R4 210 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 CHRFAM7AQ494W8 412 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 VPS26BQ4G0F5 336 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 PTPN20Q4JDL3 420 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 ASCL5Q7RTU5 278 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 CRLF3Q8IUI8 442 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 EID2Q8N6I1 236 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 INO80EQ8NBZ0 244 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 OR56A4Q8NGH8 313 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 TCP10LQ8TDR4 215 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 GPR151Q8TDV0 419 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 HGDQ93099 445 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 LRRC58Q96CX6 371 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 WDR34Q96EX3 536 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 RNF145Q96MT1 663 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 XPO6Q96QU8 1125 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 PLA2G2FQ9BZM2 168 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 CHRNA10Q9GZZ6 450 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 IFI27L2Q9H2X8 130 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 PIGUQ9H490 435 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 HRASLSQ9HDD0 168 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 ZDHHC4Q9NPG8 344 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 SHPKQ9UHJ6 478 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 SMPXQ9UHP9 88 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 CEMIPQ8WUJ3 1361 aa2.7□□□□□ -1.98
SMCHD1-213ENST00000609587 AQRO60306 1485 aaKnown RBP eCLIP2.7□□□□□ -1.985e-6■□□□□ 8.5
SMCHD1-213ENST00000609587 ASTN1O14525 1302 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ZFYVE9O95405 1425 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 IGLV4-69A0A075B6H9 119 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 PLAC8L1A1L4L8 177 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 SLC22A20A6NK97 555 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ANKRD63C9JTQ0 380 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 KMOO15229 486 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 CD5LO43866 347 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 PSIP1O75475 530 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 FARS2O95363 451 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 OXTP01178 125 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 IFNA5P01569 189 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 GNAO1P09471 354 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 MYL2P10916 166 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 CD36P16671 472 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 HLA-GP17693 338 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 BCKDHBP21953 392 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 CRABP2P29373 138 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 PCK1P35558 622 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 UGT2B10P36537 528 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 SERPINB5P36952 375 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 UBE2AP49459 152 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 RGS6P49758 472 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 NCBP2P52298 156 aaKnown RBP eCLIP2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ZNF136P52737 540 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 EIF4EBP2Q13542 120 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 NDUFA5Q16718 116 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 C9orf135Q5VTT2 229 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 LYPD2Q6UXB3 125 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 CERS6Q6ZMG9 384 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ZNF836Q6ZNA1 936 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 TMEM179Q6ZVK1 233 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ABHD13Q7L211 337 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 SLC16A14Q7RTX9 510 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 FUNDC1Q8IVP5 155 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 HS3ST5Q8IZT8 346 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 STPG2Q8N412 459 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 MS4A15Q8N5U1 240 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 HSD17B11Q8NBQ5 300 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ZNF738Q8NE65 137 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 OR5B17Q8NGF7 314 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 OR1S2Q8NGQ3 325 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 OR6N2Q8NGY6 317 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 CXorf40AQ8TE69 158 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 PYDC1Q8WXC3 89 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 TFGQ92734 400 aaPredicted RBP2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ZFP3Q96NJ6 502 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 P2RX4Q99571 388 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 SLC22A4Q9H015 551 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 DEFB129Q9H1M3 183 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 RPF2Q9H7B2 306 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ANKHQ9HCJ1 492 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ASCL3Q9NQ33 180 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 SIRT7Q9NRC8 400 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 INIPQ9NRY2 104 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 C1orf109Q9NX04 203 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 CYB5R1Q9UHQ9 305 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 ENOPH1Q9UHY7 261 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 FBXL3Q9UKT7 428 aa2.69□□□□□ -1.98
SMCHD1-213ENST00000609587 GINS2Q9Y248 185 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms