RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 SYNGR3O43761 229 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 DOK2O60496 412 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 NCR1O76036 304 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 ZFPL1O95159 310 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 PNPP00491 289 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 DAOP14920 347 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 ZNF16P17020 682 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 USF1P22415 310 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 FGF9P31371 208 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 WNT5AP41221 380 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 KIR3DL2P43630 455 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 CCR9P51686 369 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 PSG4Q00888 419 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 ALKBH6Q3KRA9 238 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 SLC36A2Q495M3 483 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 CCDC92Q53HC0 331 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 YIF1BQ5BJH7 314 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 C22orf42Q6IC83 251 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 TMEM91Q6ZNR0 172 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 DPPA2Q7Z7J5 298 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 CATSPERDQ86XM0 798 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 PRSS35Q8N3Z0 413 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 OR13C5Q8NGS8 318 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 OR5AK2Q8NH90 309 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 AKR7LQ8NHP1 331 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 NEU4Q8WWR8 484 aaPredicted RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 GTF3AQ92664 365 aaKnown RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 POM121L2Q96KW2 1035 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 KCTD7Q96MP8 289 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 DCLRE1CQ96SD1 692 aaKnown RBP9.85□□□□□ -0.83
LINC00539-204ENST00000608957 PIMREGQ9BSJ6 248 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 HDHD2Q9H0R4 259 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 RAB1BQ9H0U4 201 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 CDH20Q9HBT6 801 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 DYNLRB1Q9NP97 96 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 FAM206AQ9NX38 181 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 PLEK2Q9NYT0 353 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 GTF2A1LQ9UNN4 478 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 GSTK1Q9Y2Q3 226 aa9.85□□□□□ -0.83
LINC00539-204ENST00000608957 IGLV3-9A0A075B6K5 115 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 TMEM269A0A1B0GVZ9 245 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 M0R233 179 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 NDUFS8O00217 210 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 SGCEO43556 437 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 SC5DO75845 299 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 HPXP02790 462 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 ZNF250P15622 560 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 ZNF182P17025 639 aaPredicted RBP9.84□□□□□ -0.83
LINC00539-204ENST00000608957 GIFP27352 417 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 IL2RGP31785 369 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 CX3CR1P49238 355 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 MMP16P51512 607 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 RPS23P62266 143 aaKnown RBP9.84□□□□□ -0.83
LINC00539-204ENST00000608957 GALK2Q01415 458 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 RIN1Q13671 783 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 TBC1D28Q2M2D7 210 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 BCL2L15Q5TBC7 163 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 RGS7BPQ6MZT1 257 aaPredicted RBP9.84□□□□□ -0.83
LINC00539-204ENST00000608957 ZNF101Q8IZC7 436 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 ZNF676Q8N7Q3 588 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 ABHD4Q8TB40 342 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 UBASH3BQ8TF42 649 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 RGP1Q92546 391 aaPredicted RBP9.84□□□□□ -0.83
LINC00539-204ENST00000608957 YIPF5Q969M3 257 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 KCNJ15Q99712 375 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 OR2H1Q9GZK4 316 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 MYOZ1Q9NP98 299 aaPredicted RBP9.84□□□□□ -0.83
LINC00539-204ENST00000608957 OR52A1Q9UKL2 312 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 SPEF1Q9Y4P9 236 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 TIMM10BQ9Y5J6 103 aa9.84□□□□□ -0.83
LINC00539-204ENST00000608957 ARHGAP32A7KAX9 2087 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 DYSFO75923 2080 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 IQCMA0A1B0GVH7 501 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 LRP5LA4QPB2 252 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 OR6C6A6NF89 314 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 A8MV72 311 aaPredicted RBP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 VSTM5A8MXK1 200 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 LILRA1O75019 489 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 NAT2P11245 290 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 COL8A2P25067 703 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 STOMP27105 288 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 APLNRP35414 380 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 MPV17P39210 176 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 PRKXP51817 358 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 UCP2P55851 309 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF121P58317 390 aaPredicted RBP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 RPS11P62280 158 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 ECH1Q13011 328 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 INSL4Q14641 139 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 ACSM3Q53FZ2 586 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF774Q6NX45 483 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 CEACAM19Q7Z692 300 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 ZNF283Q8N7M2 679 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 DYNC2LI1Q8TCX1 351 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 SPTSSAQ969W0 71 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 G6PC2Q9NQR9 355 aa9.83□□□□□ -0.84
LINC00539-204ENST00000608957 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
LINC00539-204ENST00000608957 TAAR3PQ9P1P4 343 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms