RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 PAPOLGQ9BWT3 736 aaKnown RBP12.09□□□□□ -0.47
CTSA-219ENST00000607841 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ISG20L2Q9H9L3 353 aaKnown RBP12.09□□□□□ -0.47
CTSA-219ENST00000607841 C14orf119Q9NWQ9 140 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ENPP5Q9UJA9 477 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 PPP1R3CQ9UQK1 317 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 TPRKBQ9Y3C4 175 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 PRRC2AP48634 2157 aaKnown RBP12.08□□□□□ -0.48
CTSA-219ENST00000607841 ARFGEF3Q5TH69 2177 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 DHRS7CA6NNS2 312 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 CLDN25C9JDP6 229 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 RNF223E7ERA6 249 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 H7C1Q1 480 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 SLC1A7O00341 560 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 P2RY10O00398 339 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 SYT7O43581 403 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 CCDC159P0C7I6 412 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 FOSL1P15407 271 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 CCL1P22362 96 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 ACKR3P25106 362 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 CD200P41217 278 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 NR4A2P43354 598 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 GPR6P46095 362 aaPredicted RBP12.08□□□□□ -0.48
CTSA-219ENST00000607841 ETV1P50549 477 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 RIN1Q13671 783 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 KRT74Q7RTS7 529 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 PEG10Q86TG7 708 aaKnown RBP12.08□□□□□ -0.48
CTSA-219ENST00000607841 PRSS35Q8N3Z0 413 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 PLPP7Q8NBV4 271 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 PIGCQ92535 297 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 YIPF5Q969M3 257 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 TIMD4Q96H15 378 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 C18orf12Q96KH6 178 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 MICU1Q9BPX6 476 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 SOX7Q9BT81 388 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 TMUB1Q9BVT8 246 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 ZNF275Q9NSD4 429 aaPredicted RBP12.08□□□□□ -0.48
CTSA-219ENST00000607841 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 PIGLQ9Y2B2 252 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 RHBDD3Q9Y3P4 386 aa12.08□□□□□ -0.48
CTSA-219ENST00000607841 ARID1AO14497 2285 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 A0A1B0GTI1 187 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 PTGES3LE9PB15 166 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 PPIHO43447 177 aaKnown RBP12.07□□□□□ -0.48
CTSA-219ENST00000607841 RP2O75695 350 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 ISG15P05161 165 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 USF1P22415 310 aaPredicted RBP12.07□□□□□ -0.48
CTSA-219ENST00000607841 GATA4P43694 442 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 TGM4P49221 684 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 CDH15P55291 814 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 MAB21L1Q13394 359 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 ALKBH1Q13686 389 aaKnown RBP12.07□□□□□ -0.48
CTSA-219ENST00000607841 ODF4Q2M2E3 257 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 CCDC58Q4VC31 144 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 Q6ZSR3 168 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 OR14K1Q8NGZ2 314 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 OR52N1Q8NH53 320 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 HPS1Q92902 700 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 RAB1CQ92928 201 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 BPESC1Q9GZL8 116 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 PLEKHA1Q9HB21 404 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 GCM1Q9NP62 436 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 FKBP14Q9NWM8 211 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 BABAM2Q9NXR7 383 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 ERGIC3Q9Y282 383 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 V9GYS6 101 aa12.07□□□□□ -0.48
CTSA-219ENST00000607841 TMEM212A6NML5 194 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 ZNF850A8MQ14 1090 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 MYL12BO14950 172 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 DENRO43583 198 aaKnown RBP12.06□□□□□ -0.48
CTSA-219ENST00000607841 CDK1P06493 297 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 IRF2P14316 349 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 KIR3DL2P43630 455 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 NANOS3P60323 173 aaKnown RBP12.06□□□□□ -0.48
CTSA-219ENST00000607841 LOXL1Q08397 574 aaPredicted RBP12.06□□□□□ -0.48
CTSA-219ENST00000607841 PRDX4Q13162 271 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 RBM48Q5RL73 367 aaKnown RBP12.06□□□□□ -0.48
CTSA-219ENST00000607841 RNLSQ5VYX0 342 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 RPL22L1Q6P5R6 122 aaKnown RBP12.06□□□□□ -0.48
CTSA-219ENST00000607841 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 C1orf87Q8N0U7 546 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 ZNF676Q8N7Q3 588 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 OR11L1Q8NGX0 322 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 RNF166Q96A37 237 aaPredicted RBP12.06□□□□□ -0.48
CTSA-219ENST00000607841 C10orf35Q96D05 121 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 COX4I2Q96KJ9 171 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 RTL8AQ9BWD3 113 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 COMMD4Q9H0A8 199 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 FN3KRPQ9HA64 309 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 TRIM36Q9NQ86 728 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 TREM2Q9NZC2 230 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 CLEC2DQ9UHP7 191 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 BLOC1S6Q9UL45 172 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 CACNG2Q9Y698 323 aa12.06□□□□□ -0.48
CTSA-219ENST00000607841 TRBV2A0A0J9YWF9 115 aa12.05□□□□□ -0.48
CTSA-219ENST00000607841 LOC107986453A0A1B0GWG9 222 aa12.05□□□□□ -0.48
CTSA-219ENST00000607841 OR4C45A6NMZ5 311 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms