RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 ZNF442Q9H7R0 627 aa14.17□□□□□ -0.14
PMF1-206ENST00000606952 PLEKHB1Q9UF11 243 aaPredicted RBP14.17□□□□□ -0.14
PMF1-206ENST00000606952 RELNP78509 3460 aa14.17□□□□□ -0.14
PMF1-206ENST00000606952 UBR5O95071 2799 aaPredicted RBP14.17□□□□□ -0.14
PMF1-206ENST00000606952 IGLV3-9A0A075B6K5 115 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 IGKV1-9A0A0C4DH69 117 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 GGT3PA6NGU5 568 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 TUBAL3A6NHL2 446 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 ATP6V1G2-DDX39BF2Z307 99 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 ERCC1P07992 297 aaPredicted RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 ZNF250P15622 560 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 ATF1P18846 271 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 LOXP28300 417 aaPredicted RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 GNALP38405 381 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 ERVS71-1P61550 626 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 MXD1Q05195 221 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 BSPH1Q075Z2 132 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 SPOCK1Q08629 439 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 HNRNPA0Q13151 305 aaKnown RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 SNTB2Q13425 540 aaKnown RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 HLXQ14774 488 aaPredicted RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 FAM166AQ6J272 317 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 SFXN4Q6P4A7 337 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 LINC00299Q6ZSB3 139 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 OR51A2Q8NGJ7 313 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 OR13C9Q8NGT0 318 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 TMEM171Q8WVE6 324 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 ZC3HAV1LQ96H79 300 aaKnown RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 RADILQ96JH8 1075 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 TMEM138Q9NPI0 162 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 MRPL15Q9P015 296 aaKnown RBP14.16□□□□□ -0.14
PMF1-206ENST00000606952 KCNN3Q9UGI6 736 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 RHBDD3Q9Y3P4 386 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 V9GY05 133 aa14.16□□□□□ -0.14
PMF1-206ENST00000606952 PLCE1Q9P212 2302 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 CLEC18AA5D8T8 446 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 AIPO00170 330 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 GMDSO60547 372 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 PLA2G2AP14555 144 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 BDKRB2P30411 391 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 THBS2P35442 1172 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 OR10A3P58181 314 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 PSG7Q13046 419 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 CNN3Q15417 329 aaKnown RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 UBE2V2Q15819 145 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 ZNF718Q3SXZ3 478 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 TMEM255AQ5JRV8 349 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 C1orf100Q5SVJ3 147 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 RGS7BPQ6MZT1 257 aaPredicted RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 CLEC18BQ6UXF7 455 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 DMRTC2Q8IXT2 367 aaPredicted RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 CLEC18CQ8NCF0 446 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 DNAAF1Q8NEP3 725 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 LINC01560Q8TB33 94 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 SPSB1Q96BD6 273 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 FOXRED1Q96CU9 486 aaPredicted RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 CMBLQ96DG6 245 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 METTL17Q9H7H0 456 aaPredicted RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 ABCB9Q9NP78 766 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 AK6Q9Y3D8 172 aaKnown RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 MPC1Q9Y5U8 109 aa14.15□□□□□ -0.14
PMF1-206ENST00000606952 KLF2Q9Y5W3 355 aaPredicted RBP14.15□□□□□ -0.14
PMF1-206ENST00000606952 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.14□□□□□ -0.15
PMF1-206ENST00000606952 IFITM5A6NNB3 132 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 ABCD4O14678 606 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 MAS1P04201 325 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 MPV17P39210 176 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 SCAND1P57086 179 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 MSMPQ1L6U9 139 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 ZNF404Q494X3 552 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 SPATA46Q5T0L3 261 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 GLT8D1Q68CQ7 371 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 CRIP3Q6Q6R5 217 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 ACOT12Q8WYK0 555 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 AP3S1Q92572 193 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 UQCC2Q9BRT2 126 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 TMEM204Q9BSN7 226 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 MRI1Q9BV20 369 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 MMP27Q9H306 513 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 OR51B6Q9H340 312 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 TPK1Q9H3S4 243 aa14.14□□□□□ -0.15
PMF1-206ENST00000606952 PURGQ9UJV8 347 aaKnown RBP14.14□□□□□ -0.15
PMF1-206ENST00000606952 ANXA2P2A6NMY6 339 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 DEFB108AA8MXU0 73 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 SHISA9B4DS77 424 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 SLC17A2O00624 439 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 SIAH2O43255 324 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 CLPXO76031 633 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 GOSR1O95249 250 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 NRASP01111 189 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 IGHV3-13P01766 116 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 PRKACBP22694 351 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 CAV3P56539 151 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 OR2T2Q6IF00 324 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 FAM222BQ8WU58 562 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 PLPPR2Q96GM1 343 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 NEK6Q9HC98 313 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 CRIM1Q9NZV1 1036 aa14.13□□□□□ -0.15
PMF1-206ENST00000606952 A6NIN4 97 aa14.12□□□□□ -0.15
PMF1-206ENST00000606952 NCR1O76036 304 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms