RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 SLA2Q9H6Q3 261 aa13.92□□□□□ -0.18
CTSA-214ENST00000606788 DMXL2Q8TDJ6 3036 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 UBE2QL1A1L167 161 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 GJE1A6NN92 205 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 CYC1P08574 325 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 POU4F3Q15319 338 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 C15orf40Q8WUR7 153 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 SGK3Q96BR1 496 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 FOXB1Q99853 325 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 GPN1Q9HCN4 374 aaPredicted RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 CEP295Q9C0D2 2601 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 FAM221AA4D161 298 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 RGS11O94810 467 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 CFDP00746 253 aaPredicted RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 HLA-HP01893 362 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 TMEM225BP0DP42 221 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 TRIP6Q15654 476 aaKnown RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 ZNF239Q16600 458 aaKnown RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 ZNF626Q68DY1 528 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 SKA3Q8IX90 412 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 OR10R2Q8NGX6 335 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 DYRK2Q92630 601 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 RAB3CQ96E17 227 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 HDHD3Q9BSH5 251 aaPredicted RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 SPRY4Q9C004 299 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 RANBP3Q9H6Z4 567 aaPredicted RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 TAS2R8Q9NYW2 309 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 PIPOXQ9P0Z9 390 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 NOSIPQ9Y314 301 aaKnown RBP13.91□□□□□ -0.18
CTSA-214ENST00000606788 LIPGQ9Y5X9 500 aa13.91□□□□□ -0.18
CTSA-214ENST00000606788 LOC390937A0A1W2PQ73 354 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 KCNAB3O43448 404 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 CDC14BO60729 498 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 WISP2O76076 250 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 TGM6O95932 706 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 CNR1P21554 472 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 PSG4Q00888 419 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 PNPLA2Q96AD5 504 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 TTTY12Q9BZ98 90 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 BOKQ9UMX3 212 aaPredicted RBP13.9□□□□□ -0.18
CTSA-214ENST00000606788 SSX5O60225 188 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 CASRP41180 1078 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 TMEM50BP56557 158 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 LSM6P62312 80 aaKnown RBP13.9□□□□□ -0.18
CTSA-214ENST00000606788 QRFPP83859 136 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 IGFBP7Q16270 282 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 C10orf128Q5T292 105 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 KCTD9Q7L273 389 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 SLC36A1Q7Z2H8 476 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.9□□□□□ -0.18
CTSA-214ENST00000606788 FOXRED1Q96CU9 486 aaPredicted RBP13.9□□□□□ -0.18
CTSA-214ENST00000606788 S100A13Q99584 98 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 NPDC1Q9NQX5 325 aaPredicted RBP13.9□□□□□ -0.18
CTSA-214ENST00000606788 SLC7A10Q9NS82 523 aa13.9□□□□□ -0.18
CTSA-214ENST00000606788 ATMQ13315 3056 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 MRPL33O75394 65 aaKnown RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 SLC22A5O76082 557 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 ZNF883P0CG24 379 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 BLVRBP30043 206 aaPredicted RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 GRK1Q15835 563 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 ATPAF1Q5TC12 328 aaPredicted RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 TMEM251Q8N6I4 163 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 BHLHE23Q8NDY6 225 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 REEP6Q96HR9 211 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 DDA1Q9BW61 102 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 TMEM38BQ9NVV0 291 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 SCP2D1Q9UJQ7 156 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 VSIG4Q9Y279 399 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 NOP16Q9Y3C1 178 aaKnown RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 ACACAQ13085 2346 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 LOC102725191A0A1B0GVB3 256 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 NKX2-8O15522 239 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 MPC2O95563 127 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 OR4E1P0C645 316 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 FKBP2P26885 142 aaKnown RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 NPY4RP50391 375 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 MTCP1P56278 107 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 BEX5Q5H9J7 111 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 CDH24Q86UP0 819 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 ADAD2Q8NCV1 583 aaKnown RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 SPTSSAQ969W0 71 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 C1orf147Q96MC9 270 aaPredicted RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 ZNF701Q9NV72 531 aaPredicted RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 IGHV3-64DA0A0J9YX35 117 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 A0A1W2PR80 420 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 POM121CA8CG34 1229 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 BPNT1O95861 308 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 HLA-AP01891 365 aaKnown RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 IFNA6P05013 189 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 SORDQ00796 357 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 DNM1P46Q6ZS02 220 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 C6orf201Q7Z4U5 140 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 AQP3Q92482 292 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 ADGRG7Q96K78 797 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 ZNF703Q9H7S9 590 aaPredicted RBP13.89□□□□□ -0.19
CTSA-214ENST00000606788 PLEKHA6Q9Y2H5 1048 aa13.89□□□□□ -0.19
CTSA-214ENST00000606788 ANKRD34BA5PLL1 514 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 OR2AT4A6NND4 320 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms