RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 SPTSSAQ969W0 71 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 MS4A3Q96HJ5 214 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 DIRAS2Q96HU8 199 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 ZNF75AQ96N20 296 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 HS3ST6Q96QI5 342 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 KCNJ15Q99712 375 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 SOSTQ9BQB4 213 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 BCL2L14Q9BZR8 327 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 UBTD1Q9HAC8 227 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 CISD1Q9NZ45 108 aaKnown RBP8.7□□□□□ -1.02
UPF1-213ENST00000601981 FOXJ3Q9UPW0 622 aa8.7□□□□□ -1.02
UPF1-213ENST00000601981 AK6Q9Y3D8 172 aaKnown RBP8.7□□□□□ -1.02
UPF1-213ENST00000601981 ANKRD17O75179 2603 aaKnown RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 AKAP6Q13023 2319 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 DCHS2Q6V1P9 2916 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 NOTCH2Q04721 2471 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 FABP12A6NFH5 140 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SHISA9B4DS77 424 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 J3QW42 95 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 TBX1O43435 398 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SYNGR3O43761 229 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 TTRP02766 147 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ACSM4P0C7M7 580 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ATF1P18846 271 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 LOXP28300 417 aaPredicted RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 OTX1P32242 354 aaPredicted RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 CX3CR1P49238 355 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 EVX1P49640 407 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 TPTEP56180 551 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SCAND1P57086 179 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ZNF121P58317 390 aaPredicted RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 SELENOVP59797 346 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 IFITM3Q01628 133 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SPOCK1Q08629 439 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SNTB2Q13425 540 aaKnown RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 RIN1Q13671 783 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ZNF79Q15937 498 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 CCDC92Q53HC0 331 aaPredicted RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 CNIH2Q6PI25 160 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 FAM131AQ6UXB0 335 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ZNF584Q8IVC4 421 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 FBXL14Q8N1E6 418 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ZNF283Q8N7M2 679 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ZNF611Q8N823 705 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 GDPD1Q8N9F7 314 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 MINDY2Q8NBR6 621 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 CPEB3Q8NE35 698 aaKnown RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 OR13C3Q8NGS6 347 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 CHPT1Q8WUD6 406 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 PPP1R14AQ96A00 147 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 ORAI1Q96D31 301 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 POM121L2Q96KW2 1035 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 CMTM3Q96MX0 182 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SDHCQ99643 169 aaPredicted RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 GFI1Q99684 422 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 DHRS9Q9BPW9 319 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 SRRQ9GZT4 340 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 CKLFQ9UBR5 152 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 FBXO9Q9UK97 447 aaPredicted RBP8.69□□□□□ -1.02
UPF1-213ENST00000601981 V9GY05 133 aa8.69□□□□□ -1.02
UPF1-213ENST00000601981 TRAV8-7A0A075B6U6 113 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 A0A1B0GVI7 797 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 ANXA2P2A6NMY6 339 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 IFITM5A6NNB3 132 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 HAX1O00165 279 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 P2RY10O00398 339 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 SYT7O43581 403 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 PLAUP00749 431 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 APOA1P02647 267 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 ANXA2P07355 339 aaKnown RBP8.68□□□□□ -1.02
UPF1-213ENST00000601981 CALCBP10092 127 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 SLC2A2P11168 524 aaPredicted RBP8.68□□□□□ -1.02
UPF1-213ENST00000601981 ZNF35P13682 527 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 IGFBP3P17936 291 aaPredicted RBP8.68□□□□□ -1.02
UPF1-213ENST00000601981 ADRA2CP18825 462 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 CCL1P22362 96 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 TUBG1P23258 451 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 CALCRP30988 508 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 APOBEC3AP31941 199 aaPredicted RBP8.68□□□□□ -1.02
UPF1-213ENST00000601981 GLRXP35754 106 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 FABP6P51161 128 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 PRKXP51817 358 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 RGS7BPQ6MZT1 257 aaPredicted RBP8.68□□□□□ -1.02
UPF1-213ENST00000601981 VHLLQ6RSH7 139 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 PRSS45Q7RTY3 260 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 MYPOPQ86VE0 399 aaPredicted RBP8.68□□□□□ -1.02
UPF1-213ENST00000601981 LYSMD2Q8IV50 215 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 SAMD12Q8N8I0 201 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 CCDC54Q8NEL0 328 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 OR8B12Q8NGG6 310 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 OR5L1Q8NGL2 311 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 OCEL1Q9H607 264 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 ZNF442Q9H7R0 627 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 PLEKHF2Q9H8W4 249 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 SP140LQ9H930 580 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 BRD7Q9NPI1 651 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 TUBG2Q9NRH3 451 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 ABCB10Q9NRK6 738 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 CYSLTR2Q9NS75 346 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms