RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 TMEM246Q9BRR3 403 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 C9orf16Q9BUW7 83 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 RTL8AQ9BWD3 113 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 SSBP3Q9BWW4 388 aaPredicted RBP13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 PBOV1Q9GZY1 135 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 OCEL1Q9H607 264 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 TMEM165Q9HC07 324 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 FAM206AQ9NX38 181 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 USE1Q9NZ43 259 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 LRCH1Q9Y2L9 728 aa13.31□□□□□ -0.28
PPFIA4-213ENST00000601609 ZNF850A8MQ14 1090 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 PRR32B1ATL7 298 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 J3QLI3 93 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 MAGEB4O15481 346 aaPredicted RBP13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 RPP14O95059 124 aaKnown RBP13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 KRT8P05787 483 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 ADRA2CP18825 462 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 GATA3P23771 443 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 ZFP36P26651 326 aaKnown RBP13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 HTR1FP30939 366 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 MAP2K3P46734 347 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 EFNB1P98172 346 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 ROM1Q03395 351 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 MFGE8Q08431 387 aaPredicted RBP13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 KCNJ8Q15842 424 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 BCL2L15Q5TBC7 163 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 PLEKHG7Q6ZR37 379 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 ZDHHC23Q8IYP9 409 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 YIPF7Q8N8F6 280 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 PLPP7Q8NBV4 271 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 LYZL4Q96KX0 146 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 ABCB9Q9NP78 766 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 HAO2Q9NYQ3 351 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 MPC1Q9Y5U8 109 aa13.3□□□□□ -0.28
PPFIA4-213ENST00000601609 ACOD1A6NK06 481 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 F5H0A9 414 aaPredicted RBP13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 LGALS8O00214 317 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 ACKR3P25106 362 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 PITPNBP48739 271 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 CSNK2BP67870 215 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 HOXA4Q00056 320 aaPredicted RBP13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 EGR3Q06889 387 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 DCDC5Q6ZRR9 648 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 FAM220AQ7Z4H9 259 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 OR1M1Q8NGA1 313 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 OR51E1Q8TCB6 317 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 LRRC29Q8WV35 223 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 EME1Q96AY2 570 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 TECTBQ96PL2 329 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 MDFIQ99750 246 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 MRI1Q9BV20 369 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 TMPRSS13Q9BYE2 586 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 PPP1R3EQ9H7J1 279 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 MOB1AQ9H8S9 216 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 TRIM36Q9NQ86 728 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 GPR84Q9NQS5 396 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 GMPPBQ9Y5P6 360 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 R4GMQ9 66 aa13.29□□□□□ -0.28
PPFIA4-213ENST00000601609 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 A0A0U1RQV5 110 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 ZNF816-ZNF321PA0A0X1KG74 233 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 OOEPA6NGQ2 149 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 PTBP3O95758 552 aaKnown RBP13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 WNT2P09544 360 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 DCTDP32321 178 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 GMFBP60983 142 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 SRSF2Q01130 221 aaKnown RBP13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 ARMCX4Q5H9R4 360 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 BTNL3Q6UXE8 466 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 ZBTB49Q6ZSB9 765 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 SEMA6DQ8NFY4 1073 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 NANPQ8TBE9 248 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 TMEM158Q8WZ71 300 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 RNF170Q96K19 258 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 MMP26Q9NRE1 261 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 CLN8Q9UBY8 286 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 NUFIP1Q9UHK0 495 aaKnown RBP13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 RRP15Q9Y3B9 282 aaKnown RBP13.28□□□□□ -0.28
PPFIA4-213ENST00000601609 IGHV3OR15-7A0A075B7D8 119 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 A0A1W2PQL4 384 aaPredicted RBP13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 SNTNA6NMZ2 147 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 A8MXK9 166 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 ADAM20O43506 726 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 TCF21O43680 179 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 MTRF1O75570 445 aaKnown RBP13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 RGS9O75916 674 aaPredicted RBP13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 CST4P01036 141 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 AVPP01185 164 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 GYPAP02724 150 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 OR2T7P0C7T2 308 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 EPHA1P21709 976 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 RIPPLY1Q0D2K3 151 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 ZNF154Q13106 437 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 TMED1Q13445 227 aa13.27□□□□□ -0.29
PPFIA4-213ENST00000601609 ODF4Q2M2E3 257 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms