RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 FKBP9P1Q75LS8 142 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 KRT74Q7RTS7 529 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 SLC16A9Q7RTY1 509 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 SLC36A1Q7Z2H8 476 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 DPY19L4Q7Z388 723 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 CMTM4Q8IZR5 234 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 LYG1Q8N1E2 194 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 KLHDC1Q8N7A1 406 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 SDR9C7Q8NEX9 313 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 ANGPTL6Q8NI99 470 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 DYDC1Q8WWB3 177 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 SPTSSAQ969W0 71 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 PHF21AQ96BD5 680 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 RCN3Q96D15 328 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 GAFA1Q96PS6 74 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 RAB3IPQ96QF0 476 aaPredicted RBP4.96□□□□□ -1.62
VRK3-220ENST00000600259 KCNJ15Q99712 375 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 NDEL1Q9GZM8 345 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 WNT10AQ9GZT5 417 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 DNTTIP1Q9H147 329 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 MMP28Q9H239 520 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 TOR3AQ9H497 397 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 RANBP3Q9H6Z4 567 aaPredicted RBP4.96□□□□□ -1.62
VRK3-220ENST00000600259 ZNF702PQ9H963 129 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 HAO2Q9NYQ3 351 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 AURKCQ9UQB9 309 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 AP3M1Q9Y2T2 418 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 RHBDD3Q9Y3P4 386 aa4.96□□□□□ -1.62
VRK3-220ENST00000600259 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 hCG_38984A0A1B0GV85 526 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 hCG_1807616A0A1W2PRN6 198 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 BTBD17A6NE02 478 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 FAM90A8PA6NJQ4 464 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 K7EIL1 84 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 SIGLEC5O15389 551 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 XPNPEP2O43895 674 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 SEMG1P04279 462 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 ACAA1P09110 424 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 VSIG8P0DPA2 414 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 TROVE2P10155 538 aaKnown RBP eCLIP4.95□□□□□ -1.62
VRK3-220ENST00000600259 CD28P10747 220 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 SLC6A6P31641 620 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 GRK5P34947 590 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 NAA10P41227 235 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 GSK3AP49840 483 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 SLC7A2P52569 658 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 CAV3P56539 151 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 EMX1Q04741 257 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.95□□□□□ -1.62
VRK3-220ENST00000600259 MZT1Q08AG7 82 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 SF3A3Q12874 501 aaKnown RBP eCLIP4.95□□□□□ -1.62
VRK3-220ENST00000600259 IKZF1Q13422 519 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 MAPRE2Q15555 327 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 LRRC10Q5BKY1 277 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 FGD3Q5JSP0 725 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 LDLRAD2Q5SZI1 272 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 LINC01590Q5TEZ4 76 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 FOXB2Q5VYV0 432 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 C11orf87Q6NUJ2 197 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 CCBE1Q6UXH8 406 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 Q6ZS46 218 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 DCXRQ7Z4W1 244 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 CYP4Z1Q86W10 505 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 ZDHHC21Q8IVQ6 265 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 DYNAPQ8N1N2 210 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 ZNF511Q8NB15 262 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 CYB561A3Q8NBI2 242 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 OR9Q1Q8NGQ5 310 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 OR10Z1Q8NGY1 313 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 OR52J3Q8NH60 311 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 DUS3LQ96G46 650 aaKnown RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 CITED2Q99967 270 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 HOPXQ9BPY8 73 aaPredicted RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 NMNAT2Q9BZQ4 307 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 METTL8Q9H825 291 aaKnown RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 SNTG1Q9NSN8 517 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 DCAF13Q9NV06 445 aaKnown RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 MRGBPQ9NV56 204 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 ABCD2Q9UBJ2 740 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 CD300AQ9UGN4 299 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 ZNF391Q9UJN7 358 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 ZNF222Q9UK12 451 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 SF3B6Q9Y3B4 125 aaKnown RBP4.95□□□□□ -1.62
VRK3-220ENST00000600259 CAPN7Q9Y6W3 813 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 COMMD3-BMI1R4GMX3 469 aa4.95□□□□□ -1.62
VRK3-220ENST00000600259 IGKV1D-17A0A075B6S4 117 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 DHRS12A0PJE2 317 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 ANKRD30BLA7E2S9 258 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 VGLL3A8MV65 326 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 HMGB1P1B2RPK0 211 aaPredicted RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 ZNF593O00488 134 aaPredicted RBP4.94□□□□□ -1.62
VRK3-220ENST00000600259 SLC22A2O15244 555 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 AKR7A2O43488 359 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 XRCC2O43543 280 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 TIPRLO75663 272 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 PAHP00439 452 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 HLA-DQA2P01906 255 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 VSIG10L2P0DP72 767 aa4.94□□□□□ -1.62
VRK3-220ENST00000600259 COX4I1P13073 169 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms