RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CSPG4Q6UVK1 2322 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 IGHV1-69-2A0A0G2JMI3 117 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 GMDSO60547 372 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 LMX1BO60663 402 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 CDC14BO60729 498 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 ISG15P05161 165 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 CDK1P06493 297 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 ERCC1P07992 297 aaPredicted RBP11.61□□□□□ -0.55
VRK3-219ENST00000600137 ACHEP22303 614 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 CRHBPP24387 322 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 GATA4P43694 442 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 MAP2K3P46734 347 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 TGM4P49221 684 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 ALKBH1Q13686 389 aaKnown RBP11.61□□□□□ -0.55
VRK3-219ENST00000600137 IRF3Q14653 427 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 SNCBQ16143 134 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 TMEM42Q69YG0 159 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 CLEC2AQ6UVW9 174 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 WDR86Q86TI4 376 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 C11orf53Q8IXP5 236 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 ZNF540Q8NDQ6 660 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 CSNK2A3Q8NEV1 391 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 ITPKCQ96DU7 683 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 FAM71F1Q96KD3 344 aaPredicted RBP11.61□□□□□ -0.55
VRK3-219ENST00000600137 CNBD2Q96M20 576 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 REG4Q9BYZ8 158 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 SLC22A4Q9H015 551 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 RASSF4Q9H2L5 321 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 CHODLQ9H9P2 273 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 SAP30LQ9HAJ7 183 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 GCM1Q9NP62 436 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 ZNF275Q9NSD4 429 aaPredicted RBP11.61□□□□□ -0.55
VRK3-219ENST00000600137 DECR2Q9NUI1 292 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 GTF2A1LQ9UNN4 478 aa11.61□□□□□ -0.55
VRK3-219ENST00000600137 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 NDUFS8O00217 210 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 OGG1O15527 345 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 DHRS3O75911 302 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 HTR1AP08908 422 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 CSF3P09919 207 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 NR4A2P43354 598 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 TMEM33P57088 247 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 OR8G1Q15617 311 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 MPPED2Q15777 294 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 ODF4Q2M2E3 257 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 FAM76BQ5HYJ3 339 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 FAM220AQ7Z4H9 259 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 KLBQ86Z14 1044 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 CELF2-AS1Q8N7Q2 184 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 NANOGP1Q8N7R0 232 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 OR52N1Q8NH53 320 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 HPSE2Q8WWQ2 592 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 CDCA4Q9BXL8 241 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 EGLN1Q9GZT9 426 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 BABAM2Q9NXR7 383 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 ERVK-18Q9QC07 812 aa11.6□□□□□ -0.55
VRK3-219ENST00000600137 TLN2Q9Y4G6 2542 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ABCA2Q9BZC7 2435 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ZNF816-ZNF321PA0A0X1KG74 233 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 DHRS7CA6NNS2 312 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ANKRD30BLA7E2S9 258 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ZNF850A8MQ14 1090 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 RNF223E7ERA6 249 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 H7C1Q1 480 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 WNT9BO14905 357 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ZFPL1O95159 310 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 FAHP16930 419 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 RIPPLY1Q0D2K3 151 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 PRDX4Q13162 271 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 DMRTC1Q5HYR2 192 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ZBTB37Q5TC79 503 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 DOK3Q7L591 496 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 STX19Q8N4C7 294 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 KLHL36Q8N4N3 616 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 SEMA6DQ8NFY4 1073 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 OR51A4Q8NGJ6 313 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ZNF420Q8TAQ5 688 aaPredicted RBP11.59□□□□□ -0.55
VRK3-219ENST00000600137 GATAD2BQ8WXI9 593 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 OR5P3Q8WZ94 311 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 RGP1Q92546 391 aaPredicted RBP11.59□□□□□ -0.55
VRK3-219ENST00000600137 MRPL48Q96GC5 212 aaKnown RBP11.59□□□□□ -0.55
VRK3-219ENST00000600137 COX4I2Q96KJ9 171 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ADAT1Q9BUB4 502 aaKnown RBP11.59□□□□□ -0.55
VRK3-219ENST00000600137 BPESC1Q9GZL8 116 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 PIGLQ9Y2B2 252 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 LSM2Q9Y333 95 aaKnown RBP11.59□□□□□ -0.55
VRK3-219ENST00000600137 MPC1Q9Y5U8 109 aa11.59□□□□□ -0.55
VRK3-219ENST00000600137 ABCA1O95477 2261 aa11.58□□□□□ -0.55
VRK3-219ENST00000600137 ANK3Q12955 4377 aaKnown RBP11.58□□□□□ -0.55
VRK3-219ENST00000600137 MTORP42345 2549 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 IGHV4-61A0A0C4DH41 118 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 LOC107986453A0A1B0GWG9 222 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 A6NIN4 97 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 H3BSH0 61 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 TPD52L2O43399 206 aaKnown RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 MTRF1O75570 445 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms