RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ACBD7Q8N6N7 88 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 YIPF7Q8N8F6 280 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 HPS1Q92902 700 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 ITPKCQ96DU7 683 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 FGF20Q9NP95 211 aaPredicted RBP16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 PPP1R3CQ9UQK1 317 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 SNX5Q9Y5X3 404 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 NPTNQ9Y639 398 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 V9GYS6 101 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 SNTNA6NMZ2 147 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 FAM157AC9JC47 383 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 H0YJX3 145 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 RPP14O95059 124 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 LIMS3P0CW19 117 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 LIMS4P0CW20 117 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 ATP6V1E1P36543 226 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 PSMB10P40306 273 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 RIPK1Q13546 671 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 GALEQ14376 348 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 ZMYND11Q15326 602 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 C6orf52Q5T4I8 152 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 FDX2Q6P4F2 183 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 KLBQ86Z14 1044 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 CSNK2A3Q8NEV1 391 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 OR14K1Q8NGZ2 314 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 PELI1Q96FA3 418 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 ISG20L2Q9H9L3 353 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 ERVK13-1Q9NX77 482 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 RPL36Q9Y3U8 105 aaKnown RBP16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 PCDHGB1Q9Y5G3 927 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 HSPE1-MOB4S4R3N1 261 aa16.4■□□□□ 0.22
SHKBP1-221ENST00000599833 ARHGAP32A7KAX9 2087 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF16P17020 682 aaPredicted RBP16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 BCL2L15Q5TBC7 163 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 TMEM42Q69YG0 159 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 LHFPL3Q86UP9 236 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 TLNRD1Q9H1K6 362 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 NARFLQ9H6Q4 476 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 GNG8Q9UK08 70 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 C2CD3Q4AC94 2353 aa16.39■□□□□ 0.21
SHKBP1-221ENST00000599833 DAPL1A0PJW8 107 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ANKRD30BLA7E2S9 258 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 P2RY10O00398 339 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 DHRS3O75911 302 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 FSTL3O95633 263 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ATP6V1G2O95670 118 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 CYB5R3P00387 301 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 IGHV2-5P01817 119 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ATP6V1B1P15313 513 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 THBS2P35442 1172 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 CDH15P55291 814 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF154Q13106 437 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 PRDX4Q13162 271 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 FAM201AQ5SY85 155 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 KCTD20Q7Z5Y7 419 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 SETD9Q8NE22 299 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 OR5P3Q8WZ94 311 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ERGIC1Q969X5 290 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 FAM71F1Q96KD3 344 aaPredicted RBP16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ALG8Q9BVK2 526 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 INPP5EQ9NRR6 644 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 FRRS1LQ9P0K9 344 aa16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 NOP16Q9Y3C1 178 aaKnown RBP16.38■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF850A8MQ14 1090 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 E9PI62 339 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 FADS2O95864 444 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 GZMKP49863 264 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 SLC3A1Q07837 685 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 FAM76BQ5HYJ3 339 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 ZBTB37Q5TC79 503 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 LRRC28Q86X40 367 aaPredicted RBP16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 SYS1Q8N2H4 156 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 SPERTQ8NA61 448 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 OR1M1Q8NGA1 313 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 OR2G2Q8NGZ5 317 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 RAB1CQ92928 201 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 C4orf36Q96KX1 117 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 PAPOLGQ9BWT3 736 aaKnown RBP16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 UFSP2Q9NUQ7 469 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 MPC1Q9Y5U8 109 aa16.37■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF816-ZNF321PA0A0X1KG74 233 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 INAFM1C9JVW0 142 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 F5H0A9 414 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 IFNL4K9M1U5 179 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 LMX1BO60663 402 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 LHBP01229 141 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 FAHP16930 419 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 HOXB4P17483 251 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 MAP2K3P46734 347 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 ETV1P50549 477 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 BTG1P62324 171 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 DOC2BQ14184 412 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 TMEM155Q4W5P6 130 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 KLHL22Q53GT1 634 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 CYB5R2Q6BCY4 276 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF826PQ6ZT77 177 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 EGFL6Q8IUX8 553 aa16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 C8orf59Q8N0T1 100 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-221ENST00000599833 ZNF485Q8NCK3 441 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms